y
Basic Information | |
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Species | Arabidopsis thaliana |
Cazyme ID | AT5G07420.1 |
Family | CE8 |
Protein Properties | Length: 362 Molecular Weight: 39658.3 Isoelectric Point: 9.3968 |
Chromosome | Chromosome/Scaffold: 5 Start: 2349455 End: 2351509 |
Description | pectinesterase, putative, expressed |
View CDS |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 67 | 350 | 0 |
IIVNQNGGGDFKTINAAIKSIPLANKNRVIIKLAPGIYHEKVTVDVGRPYVTLLGKPGAETNLTYAGTAAKYGTVESATLIVWATNFLAANLNIINTSPM PKPGTQGQALAMRINGDKAAFYNCRFYGFQDTLCDDRGNHFFKNCYIEGTYDFIFGRGASLYLTTQLHAVGDGLRVIAAHNRQSTTEQNGYSFVHCKVTG VGTGIYLGRAWMSHPKVVYSYTEMSSVVNPSGWQENRVRAHDKTVFYGEYMCTGPGSHKAKRVAHTQDIDNKEASQFLTLGYIK |
Full Sequence |
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Protein Sequence Length: 362 Download |
MGYISLALVA LLVFFASPVV LADDITPIPA DRAQIPQWFM ANVKPFSQRR GTLDPELEAA 60 EASRRVIIVN QNGGGDFKTI NAAIKSIPLA NKNRVIIKLA PGIYHEKVTV DVGRPYVTLL 120 GKPGAETNLT YAGTAAKYGT VESATLIVWA TNFLAANLNI INTSPMPKPG TQGQALAMRI 180 NGDKAAFYNC RFYGFQDTLC DDRGNHFFKN CYIEGTYDFI FGRGASLYLT TQLHAVGDGL 240 RVIAAHNRQS TTEQNGYSFV HCKVTGVGTG IYLGRAWMSH PKVVYSYTEM SSVVNPSGWQ 300 ENRVRAHDKT VFYGEYMCTG PGSHKAKRVA HTQDIDNKEA SQFLTLGYIK GSKWLLPPPA 360 Y* 420 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02634 | PLN02634 | 1.0e-86 | 65 | 360 | 305 | + probable pectinesterase | ||
PLN02304 | PLN02304 | 1.0e-87 | 66 | 357 | 302 | + probable pectinesterase | ||
PLN02432 | PLN02432 | 1.0e-95 | 66 | 355 | 290 | + putative pectinesterase | ||
PLN02682 | PLN02682 | 2.0e-104 | 27 | 357 | 345 | + pectinesterase family protein | ||
PLN02665 | PLN02665 | 0 | 23 | 361 | 341 | + pectinesterase family protein |
Gene Ontology | |
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GO Term | Description |
GO:0005618 | cell wall |
GO:0009505 | plant-type cell wall |
GO:0012505 | endomembrane system |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAG52566.1 | 0 | 19 | 360 | 1 | 337 | AC010675_14 putative pectin methylesterase; 8433-9798 [Arabidopsis thaliana] |
RefSeq | NP_177152.2 | 0 | 1 | 360 | 1 | 360 | PPME1; pectinesterase [Arabidopsis thaliana] |
RefSeq | NP_196359.1 | 0 | 23 | 361 | 23 | 361 | pectinesterase family protein [Arabidopsis thaliana] |
RefSeq | NP_196360.1 | 0 | 24 | 361 | 24 | 361 | pectinesterase family protein [Arabidopsis thaliana] |
RefSeq | NP_568181.1 | 0 | 8 | 360 | 9 | 360 | pectinesterase family protein [Arabidopsis thaliana] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 1e-36 | 67 | 355 | 9 | 308 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 2e-34 | 68 | 355 | 6 | 304 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 3uw0_A | 8e-20 | 62 | 286 | 29 | 276 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
PDB | 1qjv_B | 0.000000000000001 | 66 | 233 | 7 | 190 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 1qjv_A | 0.000000000000001 | 66 | 233 | 7 | 190 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
homogalacturonan degradation | RXN-2102 | EC-3.1.1.11 | pectinesterase |