| Basic Information | |
|---|---|
| Species | Arabidopsis thaliana |
| Cazyme ID | AT5G12950.1 |
| Family | GH127 |
| Protein Properties | Length: 862 Molecular Weight: 96236 Isoelectric Point: 7.1392 |
| Chromosome | Chromosome/Scaffold: 5 Start: 4092953 End: 4096975 |
| Description | DUF1680 domain containing protein, putative, expressed |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH127 | 363 | 632 | 5.8e-27 |
| ISMFFMDIFNASHSYATGGTSVSEFWQDPKRMATALQTENEESCTTYNMLKVSRNLFRWTKEVSYADYYERALTNGVLGIQRGTQPGLMIYMLPLGKGVS KAVTYHGWGTPYDSFWCCYGTGIESFSKLGDSIYFQEDGATPALYVTQYISSSLDWKSAGLSISQKVNPVVSWDPYMRVTFTLSSSKVGVAKESTLNLRI PVWTNSIGAKVSLNGRPLNVPTSGNFLSIKQKWKSGDQVTMELPMSIRTEAIKDDRPEYASLQAILYGPY | |||
| Full Sequence |
|---|
| Protein Sequence Length: 862 Download |
| MKSGLIITIA LLLYTSSFVL VSVAKECTNT PTQLSSHTFR SELLQSKNET LKTELFSHYH 60 LTPADDSAWS SLLPRKMLKE EADEFAWTML YRKFKDSNSS GNFLKDVSLH DVRLDPDSFH 120 WRAQQTNLEY LLMLDVDGLA WSFRKEAGLD APGDYYGGWE RPDSELRGHF VGHYLSATAY 180 MWASTHNDTL KEKMSALVSA LSECQQKSGT GYLSAFPSSF FDRFEAITPV WAPYYTIHKI 240 LAGLVDQYKL AGNSQALKMA TGMADYFYGR VRNVIRKYSV ERHWQSLNEE TGGMNDVLYQ 300 LYSITGDSKY LLLAHLFDKP CFLGVLAIQA DDISGFHANT HIPIVVGSQQ RYEITGDLLH 360 KEISMFFMDI FNASHSYATG GTSVSEFWQD PKRMATALQT ENEESCTTYN MLKVSRNLFR 420 WTKEVSYADY YERALTNGVL GIQRGTQPGL MIYMLPLGKG VSKAVTYHGW GTPYDSFWCC 480 YGTGIESFSK LGDSIYFQED GATPALYVTQ YISSSLDWKS AGLSISQKVN PVVSWDPYMR 540 VTFTLSSSKV GVAKESTLNL RIPVWTNSIG AKVSLNGRPL NVPTSGNFLS IKQKWKSGDQ 600 VTMELPMSIR TEAIKDDRPE YASLQAILYG PYLLAGHTSR DWSITTQAKP GKWITPIPET 660 QNSYLVTLSQ QSGNVSYVFS NSNQTITMRV SPEPGTQDAV AATFRLVTDN SKPRISGPEG 720 LIGRLVMLEP FDFPGMIVKQ ATDSSLTVQA SSPSDKGASS FRLVSGLDGK LGSVSLRLES 780 KKGCFVYSDQ TLKQGTKLRL ECGSDATDEK FKEAASFSLK TGMHQYNPMS FVMSGTQRNF 840 VLSPLFSLRD ETYNVYFSVQ T* 900 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG3533 | COG3533 | 2.0e-74 | 109 | 641 | 542 | + Uncharacterized protein conserved in bacteria [Function unknown] | ||
| pfam07944 | DUF1680 | 0 | 111 | 635 | 535 | + Putative glycosyl hydrolase of unknown function (DUF1680). The members of this family are sequences derived from hypothetical bacterial and eukaryotic proteins of unknown function. One members of this family is annotated as a possible arabinosidase, but no references were found to back this. These proteins are related to a large family of glycosyl hydrolases. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0003824 | catalytic activity |
| GO:0005773 | vacuole |
| GO:0009505 | plant-type cell wall |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CAB88260.1 | 0 | 25 | 860 | 24 | 859 | putative protein [Arabidopsis thaliana] |
| RefSeq | NP_196799.1 | 0 | 25 | 861 | 25 | 861 | catalytic [Arabidopsis thaliana] |
| RefSeq | NP_196800.2 | 0 | 25 | 860 | 29 | 864 | catalytic [Arabidopsis thaliana] |
| RefSeq | XP_002285548.1 | 0 | 11 | 860 | 9 | 863 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002297785.1 | 0 | 4 | 860 | 3 | 857 | predicted protein [Populus trichocarpa] |
