y
Basic Information | |
---|---|
Species | Arabidopsis thaliana |
Cazyme ID | AT5G13690.1 |
Family | GH89 |
Protein Properties | Length: 807 Molecular Weight: 92689.1 Isoelectric Point: 7.5973 |
Chromosome | Chromosome/Scaffold: 5 Start: 4415754 End: 4420371 |
Description | alpha-N-acetylglucosaminidase, putative, expressed |
View CDS |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
GH89 | 93 | 802 | 0 |
PEILIKGTTGVEIASGLHWYLKYKCNAHVSWDKTGGIQVASVPQPGHLPRIDSKRIFIRRPVPWNYYQNVVTSSYSYVWWGWERWEREIDWMALQGINLP LAFTGQEAIWQKVFKRFNISKEDLDDYFGGPAFLAWARMGNLHAWGGPLSKNWLDDQLLLQKQILSRMLKFGMTPVLPSFSGNVPSALRKIYPEANITRL DNWNTVDGDSRWCCTYLLNPSDPLFIEIGEAFIKQQTEEYGEITNIYNCDTFNENTPPTSEPEYISSLGAAVYKAMSKGNKNAVWLMQGWLFSSDSKFWK PPQLKALLHSVPFGKMIVLDLYAEVKPIWNKSAQFYGTPYIWCMLHNFGGNIEMYGALDSISSGPVDARVSKNSTMVGVGMCMEGIEQNPVVYELTSEMA FRDEKVDVQKWLKSYARRRYMKENHQIEAAWEILYHTVYNCTDGIADHNTDFIVKLPDWDPSSSVQDDLKQKDSYMISTGPYETKRRVLFQDKTADLPKA HLWYSTKEVIQALKLFLEAGDDLSRSLTYRYDMVDLTRQVLSKLANQVYTEAVTAFVKKDIGSLGQLSEKFLELIKDMDVLLASDDNCLLGTWLESAKKL AKNGDERKQYEWNARTQVTMWYDSNDVNQSKLHDYANKFWSGLLEDYYLPRARLYFNEMLKSLRDKKIFKVEKWRREWIMMSHKWQQSSSEVYPVKAKGD ALAISRHLLS |
Full Sequence |
---|
Protein Sequence Length: 807 Download |
MHSIKLVLLV LLIISFHSQT VSKHHPTIDG LLDRLDSLLP TSSVQESAAK GLLQRLLPTH 60 SQSFELRIIS KDACGGTSCF VIENYDGPGR IGPEILIKGT TGVEIASGLH WYLKYKCNAH 120 VSWDKTGGIQ VASVPQPGHL PRIDSKRIFI RRPVPWNYYQ NVVTSSYSYV WWGWERWERE 180 IDWMALQGIN LPLAFTGQEA IWQKVFKRFN ISKEDLDDYF GGPAFLAWAR MGNLHAWGGP 240 LSKNWLDDQL LLQKQILSRM LKFGMTPVLP SFSGNVPSAL RKIYPEANIT RLDNWNTVDG 300 DSRWCCTYLL NPSDPLFIEI GEAFIKQQTE EYGEITNIYN CDTFNENTPP TSEPEYISSL 360 GAAVYKAMSK GNKNAVWLMQ GWLFSSDSKF WKPPQLKALL HSVPFGKMIV LDLYAEVKPI 420 WNKSAQFYGT PYIWCMLHNF GGNIEMYGAL DSISSGPVDA RVSKNSTMVG VGMCMEGIEQ 480 NPVVYELTSE MAFRDEKVDV QKWLKSYARR RYMKENHQIE AAWEILYHTV YNCTDGIADH 540 NTDFIVKLPD WDPSSSVQDD LKQKDSYMIS TGPYETKRRV LFQDKTADLP KAHLWYSTKE 600 VIQALKLFLE AGDDLSRSLT YRYDMVDLTR QVLSKLANQV YTEAVTAFVK KDIGSLGQLS 660 EKFLELIKDM DVLLASDDNC LLGTWLESAK KLAKNGDERK QYEWNARTQV TMWYDSNDVN 720 QSKLHDYANK FWSGLLEDYY LPRARLYFNE MLKSLRDKKI FKVEKWRREW IMMSHKWQQS 780 SSEVYPVKAK GDALAISRHL LSKYFP* 840 |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam12971 | NAGLU_N | 6.0e-26 | 45 | 143 | 99 | + Alpha-N-acetylglucosaminidase (NAGLU) N-terminal domain. Alpha-N-acetylglucosaminidase, a lysosomal enzyme required for the stepwise degradation of heparan sulfate. Mutations on the alpha-N-acetylglucosaminidase (NAGLU) gene can lead to Mucopolysaccharidosis type IIIB (MPS IIIB; or Sanfilippo syndrome type B) characterized by neurological dysfunction but relatively mild somatic manifestations. The structure shows that the enzyme is composed of three domains. This N-terminal domain has an alpha-beta fold. | ||
pfam12972 | NAGLU_C | 2.0e-112 | 502 | 804 | 303 | + Alpha-N-acetylglucosaminidase (NAGLU) C-terminal domain. Alpha-N-acetylglucosaminidase, a lysosomal enzyme required for the stepwise degradation of heparan sulfate. Mutations on the alpha-N-acetylglucosaminidase (NAGLU) gene can lead to Mucopolysaccharidosis type IIIB (MPS IIIB; or Sanfilippo syndrome type B) characterized by neurological dysfunction but relatively mild somatic manifestations. The structure shows that the enzyme is composed of three domains. This C-terminal domain has an all alpha helical fold. | ||
pfam05089 | NAGLU | 0 | 158 | 497 | 340 | + Alpha-N-acetylglucosaminidase (NAGLU) tim-barrel domain. Alpha-N-acetylglucosaminidase, a lysosomal enzyme required for the stepwise degradation of heparan sulfate. Mutations on the alpha-N-acetylglucosaminidase (NAGLU) gene can lead to Mucopolysaccharidosis type IIIB (MPS IIIB; or Sanfilippo syndrome type B) characterized by neurological dysfunction but relatively mild somatic manifestations. The structure shows that the enzyme is composed of three domains. This central domain has a tim barrel fold. |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0004561 | alpha-N-acetylglucosaminidase activity |
GO:0005773 | vacuole |
GO:0048316 | seed development |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI24942.1 | 0 | 5 | 805 | 68 | 867 | unnamed protein product [Vitis vinifera] |
GenBank | EEC75285.1 | 0 | 45 | 805 | 56 | 811 | hypothetical protein OsI_11626 [Oryza sativa Indica Group] |
RefSeq | NP_196873.1 | 0 | 1 | 806 | 1 | 806 | alpha-N-acetylglucosaminidase family / NAGLU family [Arabidopsis thaliana] |
RefSeq | XP_002273084.1 | 0 | 5 | 805 | 3 | 802 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002314048.1 | 0 | 27 | 805 | 28 | 805 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2vcc_A | 0 | 50 | 795 | 175 | 867 | A Chain A, Recombinant Horseradish Peroxidase C1a Ala140gly |
PDB | 2vcb_A | 0 | 50 | 795 | 175 | 867 | A Chain A, Recombinant Horseradish Peroxidase C1a Ala140gly |
PDB | 2vca_A | 0 | 50 | 795 | 175 | 867 | A Chain A, Recombinant Horseradish Peroxidase C1a Ala140gly |
PDB | 2vc9_A | 0 | 50 | 795 | 175 | 867 | A Chain A, Family 89 Glycoside Hydrolase From Clostridium Perfringens In Complex With 2-Acetamido-1,2-Dideoxynojirmycin |
PDB | 4a4a_A | 0 | 50 | 795 | 198 | 890 | A Chain A, Cpgh89 (E483q, E601q), From Clostridium Perfringens, In Complex With Its Substrate Glcnac-Alpha-1,4-Galactose |