CAZyme Information

Basic Information
SpeciesArabidopsis thaliana
Cazyme IDAT5G17500.1
FamilyGH5
Protein PropertiesLength: 527 Molecular Weight: 59551.4 Isoelectric Point: 8.1847
ChromosomeChromosome/Scaffold: 5 Start: 5767379 End: 5769719
Descriptionglycosyl hydrolase family 5 protein, putative, expressed
View CDS
External Links
TAIR
Geo Profiles
ATTED-II
NCBI Taxonomy
Plaza
SIGnAL
CAZyDB
Entrez Gene
Signature Domain  Download full data set without filtering
FamilyStartEndEvalue
GH5353491.19993e-41
  IVNNKGHRVKLACANWPSHLKPVVAEGLSSQPMDSISKKIKDMGFNCVRLTWPLELMINDTLAFNVTVKQSFERYGLDHELQGIYTHNPYIVNTPLINVF
  QAVVYSLGRHDVMVILDNHKTVPGWCCSNDDPDAFFGDPKFNPDLWMLGLKKMATIFMNVKNVVGMSLRNELRGYNHTSKDWYKYMQKGAEAVHTSNPNV
  LVILSGLNFDADLSFLKDRPVNLSFKKKLVLELHWYSFTDGTGQWKSHNVNDFCSQMFSKERRTGGFVLDQGFPLFLSEFGTDQRGGDLEGNRYMNCMLA
  WAAEKDLDWAVWAVT
Full Sequence
Protein Sequence     Length: 527     Download
MAKAIALTVF LFLFLSLISL TLATDYPLFT KSRWIVNNKG HRVKLACANW PSHLKPVVAE    60
GLSSQPMDSI SKKIKDMGFN CVRLTWPLEL MINDTLAFNV TVKQSFERYG LDHELQGIYT    120
HNPYIVNTPL INVFQAVVYS LGRHDVMVIL DNHKTVPGWC CSNDDPDAFF GDPKFNPDLW    180
MLGLKKMATI FMNVKNVVGM SLRNELRGYN HTSKDWYKYM QKGAEAVHTS NPNVLVILSG    240
LNFDADLSFL KDRPVNLSFK KKLVLELHWY SFTDGTGQWK SHNVNDFCSQ MFSKERRTGG    300
FVLDQGFPLF LSEFGTDQRG GDLEGNRYMN CMLAWAAEKD LDWAVWAVTG VYYFREGKRG    360
VVEAYGMLDA NWHNVHNYTY LRRLSVIQPP HTGPGVKHNH HKKIFHPLTG LCLVRKSHCH    420
ESELTLGPCT KDEPWSYSHG GILEIRRGHK SCLEGETAVG KSVKLGRICT KIEQISATKM    480
HLSFNTSDGS LVCLDVDSDN NVVANSCNCL TGDTTCEPAS QWFKIF* 
Functional Domains Download unfiltered results here
Cdd IDDomainE-ValueStartEndLengthDomain Description
pfam00150Cellulase9.0e-1666347289+
Gene Ontology
GO TermDescription
GO:0003824catalytic activity
GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0005975carbohydrate metabolic process
GO:0012505endomembrane system
GO:0043169cation binding
Annotations - NR Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
GenBankAAD31066.10265263503AC007357_15 F3F19.15 [Arabidopsis thaliana]
RefSeqNP_172772.202652633533glycosyl hydrolase family 5 protein / cellulase family protein [Arabidopsis thaliana]
RefSeqNP_197172.1015261488glycosyl hydrolase family 5 protein / cellulase family protein [Arabidopsis thaliana]
RefSeqNP_197252.102552625526glycosyl hydrolase family 5 protein / cellulase family protein [Arabidopsis thaliana]
RefSeqXP_002312657.10235257508predicted protein [Populus trichocarpa]
Annotations - PDB Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
PDB1vrx_B0.00000000000001303168285A Chain A, Endocellulase E1 From Acidothermus Cellulolyticus Mutant Y245g
PDB1vrx_A0.00000000000001303168285A Chain A, Endocellulase E1 From Acidothermus Cellulolyticus Mutant Y245g
PDB1ece_B0.0000000000002303168285A Chain A, Acidothermus Cellulolyticus Endocellulase E1 Catalytic Domain In Complex With A Cellotetraose
PDB1ece_A0.0000000000002303168285A Chain A, Acidothermus Cellulolyticus Endocellulase E1 Catalytic Domain In Complex With A Cellotetraose
PDB2zun_C0.000000094338461408A Chain A, Acidothermus Cellulolyticus Endocellulase E1 Catalytic Domain In Complex With A Cellotetraose
Transmembrane Domains
StartEnd
729
Signal Peptide
Cleavage Site
23
Hydropathy
EST Download unfiltered results here
HitLengthStartEndEValue
DY282456283273090
CB290890269403080
FC879052249272750
DK4654332811344140
DY905374290603490
Orthologous Group
SpeciesID
Aquilegia coeruleaAquca_011_00429.2Aquca_011_00429.1Aquca_001_00170.1Aquca_001_00171.1Aquca_011_00425.1
Aquca_011_00424.1Aquca_011_00428.1Aquca_011_00423.1Aquca_001_00172.1
Arabidopsis lyrata471466322756864961488616326109
882032
Arabidopsis thalianaAT1G13130.1AT3G26140.1AT3G26130.1AT5G16700.1
Brachypodium distachyonBradi5g13560.1Bradi5g13550.1
Brassica rapaBra025186Bra019811Bra025187Bra026437Bra026436
Bra023580Bra013972Bra008603Bra026925
Carica papayaevm.model.supercontig_33.65evm.model.supercontig_33.69evm.model.supercontig_33.67
Capsella rubellaCarubv10008758mCarubv10019167mCarubv10016955mCarubv10002868m
Citrus clementinaCiclev10031098mCiclev10023534m
Citrus sinensisorange1.1g013842morange1.1g008330morange1.1g015062morange1.1g039248m
Cucumis sativusCucsa.286780.1Cucsa.275330.1Cucsa.115540.1Cucsa.108400.1Cucsa.115550.1
Cucsa.365480.1Cucsa.303610.1Cucsa.303620.1Cucsa.129000.1Cucsa.275320.1
Eucalyptus grandisEucgr.B03243.1Eucgr.H02462.1Eucgr.H02464.1Eucgr.H02457.1Eucgr.H02458.1
Eucgr.D01800.1
Glycine maxGlyma05g30691.1Glyma11g18350.1Glyma05g30681.1Glyma08g13880.2Glyma18g01630.1
Glyma08g13891.1Glyma08g06511.1Glyma07g08060.2
Gossypium raimondiiGorai.002G188600.1Gorai.012G173600.1
Linum usitatissimumLus10011404Lus10006462Lus10011403Lus10006461Lus10024686
Lus10032312
Malus domesticaMDP0000753366MDP0000729817
Manihot esculentacassava4.1_004696mcassava4.1_031675mcassava4.1_025125m
Medicago truncatulaMedtr4g091610.1Medtr7g012780.1Medtr7g012530.1Medtr3g086450.1Medtr7g012540.1
Medtr7g012840.1Medtr5g088330.1
Mimulus guttatusmgv1a004205mmgv1a018920mmgv1a020519mmgv1a004243mmgv1a004297m
Oryza sativaLOC_Os04g40510.2LOC_Os04g40510.1LOC_Os02g38260.1LOC_Os04g40500.1LOC_Os04g40490.1
Panicum virgatumPavirv00025159mPavirv00029795mPavirv00010845mPavirv00023661mPavirv00002791m
Pavirv00002936m
Physcomitrella patensPp1s94_121V6.1Pp1s114_176V6.1Pp1s298_71V6.1
Phaseolus vulgarisPhvul.002G258500.1Phvul.011G098000.1Phvul.002G258400.1Phvul.002G220300.1Phvul.010G095100.1
Picea abiesMA_318998g0010MA_463555g0010MA_8507901g0010MA_10432675g0010
Populus trichocarpaPotri.008G183400.2Potri.008G183400.1Potri.010G049700.1Potri.010G049800.1Potri.008G183400.3
Potri.001G097900.1Potri.T144300.1
Prunus persicappa003807m
Ricinus communis29929.m00479230190.m01129330190.m01129230190.m011291
Setaria italicaSi019475mSi009742mSi009751mSi009695m
Sorghum bicolorSb06g020270.1Sb06g020260.1Sb04g024910.1
Thellungiella halophilaThhalv10007253mThhalv10003934mThhalv10004045mThhalv10003968mThhalv10015581m
Thhalv10015466m
Vitis viniferaGSVIVT01000573001GSVIVT01019434001.470.783GSVIVT01019434001.470.783GSVIVT01019434001.35.351GSVIVT01019434001.35.351
GSVIVT01019433001GSVIVT01019436001GSVIVT01014359001GSVIVT01014358001GSVIVT01014355001
Sequence Alignments  (This image is cropped. Click for full image.)
Phylogeny  (This image is cropped. Click for full image.)