| Basic Information | |
|---|---|
| Species | Arabidopsis thaliana |
| Cazyme ID | AT5G18670.1 |
| Family | GH14 |
| Protein Properties | Length: 537 Molecular Weight: 58280.5 Isoelectric Point: 5.5928 |
| Chromosome | Chromosome/Scaffold: 5 Start: 6225956 End: 6228132 |
| Description | beta-amylase, putative, expressed |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH14 | 90 | 494 | 0 |
| FVGLPLDTVSDCNNVNHLKAITAGLKALKLLGVEGIELPIFWGVVEKEAAGKYEWSGYLAVAEIVKKVGLKLHASLSFHGSKQTEIGLPDWVAKIGDAEP GIYFTDRYGQQYKDCLSFAVDDVPVLDGKTPMEVYRGFCESFKSAFADYMGNTITGITLGLGPDGELKYPSHQHNAKLSGAGEFQCYDKHMLSALKGYAE STGNPLWGLGGPHDAPAYDQQPNSSSFFSDGGSWESQYGDFFLSWYSSLLTSHADRVLSVASSAFSGIGVPLCGKLPLLHQWHKLRSHPSELTAGFYSSN GQDRYEAIAEIFAKNSCRMIIPGMDLSDEHQSPESLSSPESLLGHIKTSCKKQGVVVSGQNSSTPVPGGFERIVENLKDENVGIDLFTYQRMGALFFSPE HFHAF | |||
| Full Sequence |
|---|
| Protein Sequence Length: 537 Download |
| MEVSVIGNPQ ARICRAELAY RELGFRFGSD VISGESRNRV SFCNQSSKWK EIAIRCSSRS 60 VKCEAIVSDD ASPFLKSTPK SKSLESVKLF VGLPLDTVSD CNNVNHLKAI TAGLKALKLL 120 GVEGIELPIF WGVVEKEAAG KYEWSGYLAV AEIVKKVGLK LHASLSFHGS KQTEIGLPDW 180 VAKIGDAEPG IYFTDRYGQQ YKDCLSFAVD DVPVLDGKTP MEVYRGFCES FKSAFADYMG 240 NTITGITLGL GPDGELKYPS HQHNAKLSGA GEFQCYDKHM LSALKGYAES TGNPLWGLGG 300 PHDAPAYDQQ PNSSSFFSDG GSWESQYGDF FLSWYSSLLT SHADRVLSVA SSAFSGIGVP 360 LCGKLPLLHQ WHKLRSHPSE LTAGFYSSNG QDRYEAIAEI FAKNSCRMII PGMDLSDEHQ 420 SPESLSSPES LLGHIKTSCK KQGVVVSGQN SSTPVPGGFE RIVENLKDEN VGIDLFTYQR 480 MGALFFSPEH FHAFTVFVRN LSQFELSSDD QASEAEVEAE TASIGSGTGA PSLQTA* 540 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02905 | PLN02905 | 5.0e-77 | 87 | 501 | 431 | + beta-amylase | ||
| PLN02801 | PLN02801 | 8.0e-83 | 73 | 501 | 447 | + beta-amylase | ||
| PLN02161 | PLN02161 | 7.0e-85 | 48 | 502 | 476 | + beta-amylase | ||
| PLN00197 | PLN00197 | 7.0e-94 | 60 | 503 | 473 | + beta-amylase; Provisional | ||
| PLN02803 | PLN02803 | 3.0e-106 | 77 | 503 | 438 | + beta-amylase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0000272 | polysaccharide catabolic process |
| GO:0003824 | catalytic activity |
| GO:0005975 | carbohydrate metabolic process |
| GO:0016161 | beta-amylase activity |
| GO:0030244 | cellulose biosynthetic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAK85300.1 | 0 | 1 | 536 | 1 | 537 | AF402598_1 putative beta-amylase BMY3 [Arabidopsis thaliana] |
| EMBL | CAI39245.1 | 0 | 1 | 536 | 1 | 536 | beta-amylase [Glycine max] |
| EMBL | CAN66037.1 | 0 | 1 | 528 | 1 | 532 | hypothetical protein [Vitis vinifera] |
| RefSeq | NP_197368.1 | 0 | 1 | 536 | 1 | 536 | BMY3; beta-amylase/ catalytic/ cation binding [Arabidopsis thaliana] |
| RefSeq | XP_002276777.1 | 0 | 1 | 528 | 1 | 532 | PREDICTED: hypothetical protein [Vitis vinifera] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1b1y_A | 0 | 87 | 501 | 6 | 435 | A Chain A, Sevenfold Mutant Of Barley Beta-Amylase |
| PDB | 1fa2_A | 0 | 87 | 524 | 13 | 466 | A Chain A, Crystal Structure Of Beta-Amylase From Sweet Potato |
| PDB | 2xgi_A | 0 | 87 | 501 | 10 | 439 | A Chain A, Crystal Structure Of Beta-Amylase From Sweet Potato |
| PDB | 2xgb_A | 0 | 87 | 501 | 10 | 439 | A Chain A, Crystal Structure Of Beta-Amylase From Sweet Potato |
| PDB | 2xg9_A | 0 | 87 | 501 | 10 | 439 | A Chain A, Crystal Structure Of Beta-Amylase From Sweet Potato |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| FY443880 | 295 | 53 | 346 | 0 |
| EX130723 | 289 | 191 | 479 | 0 |
| EG512116 | 241 | 1 | 241 | 0 |
| FY448068 | 268 | 81 | 347 | 0 |
| EG457661 | 230 | 1 | 230 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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