| Basic Information | |
|---|---|
| Species | Arabidopsis thaliana |
| Cazyme ID | AT5G18990.1 |
| Family | CE8 |
| Protein Properties | Length: 331 Molecular Weight: 36459.5 Isoelectric Point: 9.2951 |
| Chromosome | Chromosome/Scaffold: 5 Start: 6340076 End: 6341614 |
| Description | pectinesterase, putative, expressed |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CE8 | 29 | 318 | 0 |
| VIVDQSGHGNFTTIQKAIDSVPINNTHWFFINVKAGLYREKITIPQKKPFIVIVGAGKRSTRVEWDDHASLAQSPTFATLADNTVVKKITFANSYNFPSN GKINKNPRVPAVAAFIGGDKSAFYSVGFAGIQDTLWDSDGRHYFHRCTIQGAVDFILGSGQSIYQSCVIQVLGGQLGPGVTGYITAQGRTNANDANGFVF INCLVHGFGKAYLGRAWRPYSRVIFYNSNLTDVVDPLGWWEWNYQGYEKQLTYAEHGCFGSGSNTSRRAKWVKKLSASAVQHLADLSFIN | |||
| Full Sequence |
|---|
| Protein Sequence Length: 331 Download |
| MGTHRIILGL AALCCFCLPH LIEAKPFEVI VDQSGHGNFT TIQKAIDSVP INNTHWFFIN 60 VKAGLYREKI TIPQKKPFIV IVGAGKRSTR VEWDDHASLA QSPTFATLAD NTVVKKITFA 120 NSYNFPSNGK INKNPRVPAV AAFIGGDKSA FYSVGFAGIQ DTLWDSDGRH YFHRCTIQGA 180 VDFILGSGQS IYQSCVIQVL GGQLGPGVTG YITAQGRTNA NDANGFVFIN CLVHGFGKAY 240 LGRAWRPYSR VIFYNSNLTD VVDPLGWWEW NYQGYEKQLT YAEHGCFGSG SNTSRRAKWV 300 KKLSASAVQH LADLSFINRG GWVEDLPIRV * 360 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02432 | PLN02432 | 3.0e-79 | 29 | 323 | 295 | + putative pectinesterase | ||
| PLN02665 | PLN02665 | 2.0e-79 | 23 | 322 | 304 | + pectinesterase family protein | ||
| PLN02480 | PLN02480 | 5.0e-83 | 29 | 323 | 296 | + Probable pectinesterase | ||
| PLN02176 | PLN02176 | 2.0e-103 | 29 | 329 | 302 | + putative pectinesterase | ||
| PLN02497 | PLN02497 | 0 | 1 | 328 | 333 | + probable pectinesterase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005618 | cell wall |
| GO:0009505 | plant-type cell wall |
| GO:0012505 | endomembrane system |
| GO:0030599 | pectinesterase activity |
| GO:0042545 | cell wall modification |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| DDBJ | BAB01354.1 | 0 | 1 | 328 | 1 | 329 | pectin methylesterase-like protein [Arabidopsis thaliana] |
| EMBL | CBI40838.1 | 0 | 10 | 327 | 21 | 341 | unnamed protein product [Vitis vinifera] |
| RefSeq | NP_189055.1 | 0 | 1 | 328 | 1 | 333 | pectinesterase family protein [Arabidopsis thaliana] |
| RefSeq | NP_197400.1 | 0 | 1 | 330 | 1 | 330 | pectinesterase family protein [Arabidopsis thaliana] |
| RefSeq | XP_002323773.1 | 0 | 29 | 328 | 1 | 289 | predicted protein [Populus trichocarpa] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1gq8_A | 3.99931e-42 | 29 | 324 | 9 | 309 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 1xg2_A | 1e-32 | 30 | 299 | 6 | 277 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 2ntq_B | 1e-18 | 24 | 247 | 1 | 247 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 2ntq_A | 1e-18 | 24 | 247 | 1 | 247 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 2ntp_B | 1e-18 | 24 | 247 | 1 | 247 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| homogalacturonan degradation | RXN-2102 | EC-3.1.1.11 | pectinesterase |
