| Basic Information | |
|---|---|
| Species | Arabidopsis thaliana |
| Cazyme ID | AT5G19580.1 |
| Family | AA5 |
| Protein Properties | Length: 595 Molecular Weight: 64997.1 Isoelectric Point: 9.9327 |
| Chromosome | Chromosome/Scaffold: 5 Start: 6607371 End: 6609626 |
| Description | glyoxal oxidase-related, putative, expressed |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| AA5 | 74 | 593 | 0 |
| TWGGKWELFLENSGVSGMHAILMPVINKVQYYDATIWRISKIKLPPGVPCHVVDAKTNKVDCWAHSILMDVNTGALKPLGLSTDTWCSSGGLTVNGTLVS TGGYGGGANTARYLSSCENCKWEEYPQALAAKRWYSTQATLPDGKFFVIGGRDALNYEYIPEEGQNNRKLFDSLLLRQTDDPEENNLYPFVWLNTDGNLF IFANNRSILLSPKTNQVIKEFPQLPGGARNYPGSGSSALLPIQLYVKNPKVIPAEVLVCGGSKQDAYYKAGKKIYEPALQDCARIRINSAKPRWKTEMMP TPRIMSDTVILPNGDILLVNGAKRGCSGWGYGKDPAFAPLLYKPHAARGKRFRQLKPTTIPRMYHSSAIILPDGKVLVGGSNTNDGYKYNVEFPTELRVE KFSPPYLDPALANIRPKIVTTGTPKQVKYGQFFNVKVDLKEKGATKGNLKVTMLAPAFTTHSISMNMRMLILGVNNVKPAGAGYDIQAVAPPNGNIAPPG YYLIFAIYKGVPSTGEWIQV | |||
| Full Sequence |
|---|
| Protein Sequence Length: 595 Download |
| MKASTRVIWT ISVLMLAAVS EAIFPLPFLP FLPGFNNGFR DNEAVKVAKP QPAGAVGGKA 60 ARRQRGGGLD AQTTWGGKWE LFLENSGVSG MHAILMPVIN KVQYYDATIW RISKIKLPPG 120 VPCHVVDAKT NKVDCWAHSI LMDVNTGALK PLGLSTDTWC SSGGLTVNGT LVSTGGYGGG 180 ANTARYLSSC ENCKWEEYPQ ALAAKRWYST QATLPDGKFF VIGGRDALNY EYIPEEGQNN 240 RKLFDSLLLR QTDDPEENNL YPFVWLNTDG NLFIFANNRS ILLSPKTNQV IKEFPQLPGG 300 ARNYPGSGSS ALLPIQLYVK NPKVIPAEVL VCGGSKQDAY YKAGKKIYEP ALQDCARIRI 360 NSAKPRWKTE MMPTPRIMSD TVILPNGDIL LVNGAKRGCS GWGYGKDPAF APLLYKPHAA 420 RGKRFRQLKP TTIPRMYHSS AIILPDGKVL VGGSNTNDGY KYNVEFPTEL RVEKFSPPYL 480 DPALANIRPK IVTTGTPKQV KYGQFFNVKV DLKEKGATKG NLKVTMLAPA FTTHSISMNM 540 RMLILGVNNV KPAGAGYDIQ AVAPPNGNIA PPGYYLIFAI YKGVPSTGEW IQVV* 600 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam09118 | DUF1929 | 8.0e-30 | 488 | 593 | 107 | + Domain of unknown function (DUF1929). Members of this family adopt a secondary structure consisting of a bundle of seven, mostly antiparallel, beta-strands surrounding a hydrophobic core. The 7 strands are arranged in 2 sheets, in a Greek-key topology. Their precise function, has not, as yet, been defined, though they are mostly found in sugar-utilising enzymes, such as galactose oxidase. | ||
| cd02851 | E_set_GO_C | 6.0e-33 | 485 | 593 | 110 | + C-terminal Early set domain associated with the catalytic domain of galactose oxidase. E or "early" set domains are associated with the catalytic domain of galactose oxidase at the C-terminal end. Galactose oxidase is an extracellular monomeric enzyme which catalyzes the stereospecific oxidation of a broad range of primary alcohol substrates and possesses a unique mononuclear copper site essential for catalyzing a two-electron transfer reaction during the oxidation of primary alcohols to corresponding aldehydes. The second redox active center necessary for the reaction was found to be situated at a tyrosine residue. The C-terminal domain of galactose oxidase may be related to the immunoglobulin and/or fibronectin type III superfamilies. These domains are associated with different types of catalytic domains at either the N-terminal or C-terminal end and may be involved in homodimeric/tetrameric/dodecameric interactions. Members of this family include members of the alpha amylase family, sialidase, galactose oxidase, cellulase, cellulose, hyaluronate lyase, chitobiase, and chitinase, among others. | ||
| pfam07250 | Glyoxal_oxid_N | 5.0e-127 | 91 | 334 | 249 | + Glyoxal oxidase N-terminus. This family represents the N-terminus (approximately 300 residues) of a number of plant and fungal glyoxal oxidase enzymes. Glyoxal oxidase catalyzes the oxidation of aldehydes to carboxylic acids, coupled with reduction of dioxygen to hydrogen peroxide. It is an essential component of the extracellular lignin degradation pathways of the wood-rot fungus Phanerochaete chrysosporium. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0003674 | molecular_function |
| GO:0008150 | biological_process |
| GO:0012505 | endomembrane system |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAL84955.1 | 0 | 1 | 594 | 1 | 594 | AT5g19580/T20D1_100 [Arabidopsis thaliana] |
| RefSeq | NP_176897.1 | 0 | 1 | 594 | 1 | 615 | glyoxal oxidase-related [Arabidopsis thaliana] |
| RefSeq | NP_197459.1 | 0 | 1 | 594 | 1 | 594 | glyoxal oxidase-related [Arabidopsis thaliana] |
| RefSeq | XP_002324431.1 | 0 | 77 | 593 | 2 | 521 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002331167.1 | 0 | 77 | 593 | 89 | 608 | predicted protein [Populus trichocarpa] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2eib_A | 2e-18 | 157 | 594 | 225 | 638 | A Chain A, Crystal Structure Of Galactose Oxidase, W290h Mutant |
| PDB | 2eid_A | 3e-18 | 157 | 594 | 225 | 638 | A Chain A, Galactose Oxidase W290g Mutant |
| PDB | 2eic_A | 4e-18 | 157 | 594 | 225 | 638 | A Chain A, Crystal Structure Of Galactose Oxidase Mutant W290f |
| PDB | 2vz3_A | 4e-18 | 157 | 594 | 225 | 638 | A Chain A, Crystal Structure Of Galactose Oxidase Mutant W290f |
| PDB | 2vz1_A | 4e-18 | 157 | 594 | 225 | 638 | A Chain A, Crystal Structure Of Galactose Oxidase Mutant W290f |
