| Basic Information | |
|---|---|
| Species | Arabidopsis thaliana |
| Cazyme ID | AT5G19730.1 |
| Family | CE8 |
| Protein Properties | Length: 384 Molecular Weight: 42540.8 Isoelectric Point: 9.4421 |
| Chromosome | Chromosome/Scaffold: 5 Start: 6670458 End: 6673282 |
| Description | pectinesterase, putative, expressed |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CE8 | 88 | 377 | 0 |
| HKKSNKGDFTKIQDAIDSLPLINFVRVVIKVHAGVYKEKVSIPPLKAFITIEGEGAEKTTVEWGDTAQTPDSKGNPMGTYNSASFAVNSPFFVAKNITFR NTTPVPLPGAVGKQAVALRVSADNAAFFGCRMLGAQDTLYDHLGRHYYKDCYIEGSVDFIFGNALSLYEGCHVHAIADKLGAVTAQGRSSVLEDTGFSFV KCKVTGTGVLYLGRAWGPFSRVVFAYTYMDNIILPRGWYNWGDPSREMTVFYGQYKCTGAGANYGGRVAWARELTDEEAKPFLSLTFIDG | |||
| Full Sequence |
|---|
| Protein Sequence Length: 384 Download |
| MPKLNSTQAP NLFLLLLVIL LCSTQTQCHT KGLRLRPRNQ KNMNTTSDRT QNPEDEFMKW 60 VRFVGSLKHS VFKAAKNKLF PSYTLTVHKK SNKGDFTKIQ DAIDSLPLIN FVRVVIKVHA 120 GVYKEKVSIP PLKAFITIEG EGAEKTTVEW GDTAQTPDSK GNPMGTYNSA SFAVNSPFFV 180 AKNITFRNTT PVPLPGAVGK QAVALRVSAD NAAFFGCRML GAQDTLYDHL GRHYYKDCYI 240 EGSVDFIFGN ALSLYEGCHV HAIADKLGAV TAQGRSSVLE DTGFSFVKCK VTGTGVLYLG 300 RAWGPFSRVV FAYTYMDNII LPRGWYNWGD PSREMTVFYG QYKCTGAGAN YGGRVAWARE 360 LTDEEAKPFL SLTFIDGSEW IKL* 420 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02634 | PLN02634 | 3.0e-115 | 46 | 381 | 337 | + probable pectinesterase | ||
| PLN02304 | PLN02304 | 7.0e-118 | 95 | 382 | 296 | + probable pectinesterase | ||
| PLN02432 | PLN02432 | 6.0e-119 | 90 | 382 | 293 | + putative pectinesterase | ||
| PLN02665 | PLN02665 | 1.0e-120 | 89 | 381 | 295 | + pectinesterase family protein | ||
| PLN02682 | PLN02682 | 0 | 22 | 383 | 362 | + pectinesterase family protein | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005618 | cell wall |
| GO:0005737 | cytoplasm |
| GO:0009505 | plant-type cell wall |
| GO:0030599 | pectinesterase activity |
| GO:0042545 | cell wall modification |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CAN63186.1 | 0 | 14 | 383 | 10 | 379 | hypothetical protein [Vitis vinifera] |
| EMBL | CBI27989.1 | 0 | 71 | 383 | 1 | 313 | unnamed protein product [Vitis vinifera] |
| RefSeq | NP_197474.1 | 0 | 1 | 383 | 1 | 383 | pectinesterase family protein [Arabidopsis thaliana] |
| RefSeq | XP_002330522.1 | 0 | 13 | 383 | 11 | 381 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002514210.1 | 0 | 14 | 383 | 11 | 383 | Pectinesterase PPE8B precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1gq8_A | 0 | 94 | 382 | 17 | 309 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 1xg2_A | 4.06377e-44 | 87 | 382 | 6 | 305 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 3uw0_A | 6e-23 | 83 | 376 | 31 | 360 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
| PDB | 2ntq_B | 4e-20 | 82 | 369 | 3 | 328 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
| PDB | 2ntq_A | 4e-20 | 82 | 369 | 3 | 328 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| homogalacturonan degradation | RXN-2102 | EC-3.1.1.11 | pectinesterase |
