| Basic Information | |
|---|---|
| Species | Arabidopsis thaliana |
| Cazyme ID | AT5G20560.1 |
| Family | GH17 |
| Protein Properties | Length: 338 Molecular Weight: 37179.4 Isoelectric Point: 8.3069 |
| Chromosome | Chromosome/Scaffold: 5 Start: 6955368 End: 6956381 |
| Description | glycosyl hydrolases family 17, putative, expressed |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH17 | 34 | 336 | 0 |
| VGLNYGLLGDNLPSPSNVIKFYKSQNVAKIRIFEPNKDVLNALRGNRDIGVTVGIKNEDLEALAANKDAVKSWFSTNIDPYIADVNITFITVGNQAIPGD KHGPHVLPVIQSLTDLVKSRNLQISISTTVTTTSLARLKPPSAGVLTPQARQQLVPVLRLLSQTSTPIFVNIYPYYFHASDPKNVPLEYANFNNDQIVVK DGALKYSNLFDAIFDAFLWAMEKEGVKGLPLVVSETGWPSAGNGGMTTPALQYTYIGNFVKHVASGKGTPKRPNSRIDAYIFETYNENQKPVGIYQHFGL YDP | |||
| Full Sequence |
|---|
| Protein Sequence Length: 338 Download |
| MEDYSKNLFL LLFSCTALII SYYNVDSLST ASVVGLNYGL LGDNLPSPSN VIKFYKSQNV 60 AKIRIFEPNK DVLNALRGNR DIGVTVGIKN EDLEALAANK DAVKSWFSTN IDPYIADVNI 120 TFITVGNQAI PGDKHGPHVL PVIQSLTDLV KSRNLQISIS TTVTTTSLAR LKPPSAGVLT 180 PQARQQLVPV LRLLSQTSTP IFVNIYPYYF HASDPKNVPL EYANFNNDQI VVKDGALKYS 240 NLFDAIFDAF LWAMEKEGVK GLPLVVSETG WPSAGNGGMT TPALQYTYIG NFVKHVASGK 300 GTPKRPNSRI DAYIFETYNE NQKPVGIYQH FGLYDPY* 360 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG5309 | COG5309 | 0.0002 | 263 | 334 | 78 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
| pfam00332 | Glyco_hydro_17 | 8.0e-79 | 34 | 336 | 306 | + Glycosyl hydrolases family 17. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0003824 | catalytic activity |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| GO:0012505 | endomembrane system |
| GO:0043169 | cation binding |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAM62473.1 | 0 | 6 | 336 | 6 | 335 | beta-1,3-glucanase bg4 [Arabidopsis thaliana] |
| RefSeq | NP_174592.1 | 0 | 5 | 331 | 5 | 335 | beta-1,3-glucanase, putative [Arabidopsis thaliana] |
| RefSeq | NP_197533.1 | 0 | 6 | 336 | 6 | 335 | BETAG4; catalytic/ cation binding / hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] |
| RefSeq | NP_197534.1 | 0 | 6 | 336 | 6 | 344 | BG5 (beta-1,3-glucanase 5); glucan 1,3-beta-glucosidase/ hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] |
| RefSeq | NP_197556.1 | 0 | 1 | 337 | 1 | 337 | beta-1,3-glucanase, putative [Arabidopsis thaliana] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2cyg_A | 0 | 34 | 336 | 1 | 302 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 3f55_D | 0 | 34 | 336 | 2 | 305 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 3f55_C | 0 | 34 | 336 | 2 | 305 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 3f55_B | 0 | 34 | 336 | 2 | 305 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 3f55_A | 0 | 34 | 336 | 2 | 305 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| EE454654 | 209 | 6 | 214 | 0 |
| DY278959 | 312 | 29 | 336 | 0 |
| HO781618 | 340 | 2 | 336 | 0 |
| DY267406 | 310 | 29 | 334 | 0 |
| DY263355 | 312 | 29 | 336 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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