| Basic Information | |
|---|---|
| Species | Arabidopsis thaliana |
| Cazyme ID | AT5G20870.1 |
| Family | CBM43 |
| Protein Properties | Length: 502 Molecular Weight: 54565.9 Isoelectric Point: 8.1146 |
| Chromosome | Chromosome/Scaffold: 5 Start: 7079975 End: 7081769 |
| Description | glucan endo-1,3-beta-glucosidase precursor, putative, expressed |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CBM43 | 375 | 457 | 1.2e-23 |
| WCVLSTQAAGNGAATWQASATYACQNADCTSLGPGSSCAALDPTANASYAFNMYFQKMDHRRGSCDFNNLGVVTKIDPSSGSC | |||
| GH17 | 31 | 355 | 0 |
| ACNWGTQASHPLPPNIVVKLLRDNGFNKVKLFEADPGALRALGKSGIQVMVGIPNDLLATMASTVTNAELWVQQNVSQYISRYGTDIRYVAVGNEPFLKT YNNRFVRSTYPALQNVQAALVKAGLGRQVKVTVPLNADVYESSDGLPSSGDFRSDIKTLMISIVRFLADSVSPITFNIYPFLSLNADPNFPREYAFFPNG GGGGGAKPVVDGSISYTNVFDANFDTLVSALEKNGFDANKIEIIVGEVGWPTDGDQNANPAMAQRFNQGLLNRILQGQGTPRRRMAPEVYIFSLVDEDAK SIDPGKFERHWGIFSYDGAVKYPLS | |||
| Full Sequence |
|---|
| Protein Sequence Length: 502 Download |
| MSSHDTYQKL ILFCLSIFFL QNILKNVEGL ACNWGTQASH PLPPNIVVKL LRDNGFNKVK 60 LFEADPGALR ALGKSGIQVM VGIPNDLLAT MASTVTNAEL WVQQNVSQYI SRYGTDIRYV 120 AVGNEPFLKT YNNRFVRSTY PALQNVQAAL VKAGLGRQVK VTVPLNADVY ESSDGLPSSG 180 DFRSDIKTLM ISIVRFLADS VSPITFNIYP FLSLNADPNF PREYAFFPNG GGGGGAKPVV 240 DGSISYTNVF DANFDTLVSA LEKNGFDANK IEIIVGEVGW PTDGDQNANP AMAQRFNQGL 300 LNRILQGQGT PRRRMAPEVY IFSLVDEDAK SIDPGKFERH WGIFSYDGAV KYPLSLGNGR 360 PLVPTKGVRY QAREWCVLST QAAGNGAATW QASATYACQN ADCTSLGPGS SCAALDPTAN 420 ASYAFNMYFQ KMDHRRGSCD FNNLGVVTKI DPSSGSCRFP IEIDTSRQQM SNPPPRNSGA 480 SEAKYRLGAA VVMVICLVFS N* 540 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG5309 | COG5309 | 2.0e-7 | 270 | 347 | 82 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
| pfam07983 | X8 | 3.0e-11 | 375 | 446 | 79 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
| smart00768 | X8 | 2.0e-25 | 375 | 459 | 87 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
| pfam00332 | Glyco_hydro_17 | 3.0e-70 | 30 | 355 | 328 | + Glycosyl hydrolases family 17. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0003824 | catalytic activity |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| GO:0031225 | anchored to membrane |
| GO:0043169 | cation binding |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CBI27737.1 | 0 | 29 | 495 | 24 | 482 | unnamed protein product [Vitis vinifera] |
| RefSeq | NP_197587.1 | 0 | 1 | 501 | 1 | 501 | glycosyl hydrolase family 17 protein [Arabidopsis thaliana] |
| RefSeq | XP_002277217.1 | 0 | 31 | 495 | 18 | 474 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002309443.1 | 0 | 29 | 461 | 1 | 425 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002516181.1 | 0 | 4 | 499 | 18 | 499 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1ghr_A | 0 | 34 | 356 | 5 | 306 | A Chain A, Crystal Structure Of A Native Endo Beta-1,3-Glucanase (Hev B 2), A Major Allergen From Hevea Brasiliensis |
| PDB | 1aq0_B | 0 | 34 | 356 | 5 | 306 | A Chain A, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group |
| PDB | 1aq0_A | 0 | 34 | 356 | 5 | 306 | A Chain A, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group |
| PDB | 3f55_D | 8.00001e-41 | 34 | 356 | 6 | 315 | A Chain A, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group |
| PDB | 3f55_C | 8.00001e-41 | 34 | 356 | 6 | 315 | A Chain A, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group |
