y
Basic Information | |
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Species | Arabidopsis thaliana |
Cazyme ID | AT5G25820.1 |
Family | GT47 |
Protein Properties | Length: 655 Molecular Weight: 73526.2 Isoelectric Point: 10.038 |
Chromosome | Chromosome/Scaffold: 5 Start: 8997183 End: 9000329 |
Description | exostosin family protein, putative, expressed |
View CDS |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT47 | 322 | 606 | 0 |
KILKVYAYKEGNKPIMHSPILRGIYASEGWFMNIIESNNNKFVTKDPAKAHLFYLPFSSRMLEVTLYVQDSHSHRNLIKYLKDYIDFISAKYPFWNRTSG ADHFLAACHDWAPSETRKHMAKSIRALCNSDVKEGFVFGKDTSLPETFVRDPKKPLSNMGGKSANQRPILAFFAGKPDHGYLRPILLSYWGNNKDPDLKI FGKLPRTKGNKNYLQFMKTSKYCICAKGFEVNSPRVVEAIFYDCVPVIISDNFVPPFFEVLNWESFAIFIPEKDIPNLKKILMSI |
Full Sequence |
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Protein Sequence Length: 655 Download |
MRRESPWLWK VESRRLLWLL GLTFALIVTF QYIELPYAIS SIFSSTKIPI SRNSTSLIGN 60 STSAIAPSPA GDEEEVEVDQ IYDSSGNATA PAISPTTATL PPLLPILKEN ATAPTANAKA 120 PGLNPSLVKD HATAPSPSAN PPAALPGLNP SLVKENATAP APSVKSPVAL PILNPSTVKE 180 NATAPVASAK APVALPSINP SPVMKNETLP TTSKVPERNP TKKNVGDASP IVRFVPDVKE 240 NAKMPGFGVM SISEMSKQLR QNRISHNRLA KKPKWVTKPD LELLQAKYDI ENAPIDDKDP 300 FLYAPLYRNV SMFKRSYELM EKILKVYAYK EGNKPIMHSP ILRGIYASEG WFMNIIESNN 360 NKFVTKDPAK AHLFYLPFSS RMLEVTLYVQ DSHSHRNLIK YLKDYIDFIS AKYPFWNRTS 420 GADHFLAACH DWAPSETRKH MAKSIRALCN SDVKEGFVFG KDTSLPETFV RDPKKPLSNM 480 GGKSANQRPI LAFFAGKPDH GYLRPILLSY WGNNKDPDLK IFGKLPRTKG NKNYLQFMKT 540 SKYCICAKGF EVNSPRVVEA IFYDCVPVII SDNFVPPFFE VLNWESFAIF IPEKDIPNLK 600 KILMSIPESR YRSMQMRVKK VQKHFLWHAK PEKYDMFHMI LHSIWYNRVF QISV* 660 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam03016 | Exostosin | 1.0e-65 | 320 | 606 | 306 | + Exostosin family. The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. |
Gene Ontology | |
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GO Term | Description |
GO:0003824 | catalytic activity |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | NP_195005.1 | 0 | 15 | 652 | 30 | 593 | exostosin family protein [Arabidopsis thaliana] |
RefSeq | NP_197954.1 | 0 | 1 | 654 | 1 | 654 | exostosin family protein [Arabidopsis thaliana] |
RefSeq | XP_002281263.1 | 0 | 7 | 654 | 7 | 668 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002309547.1 | 0 | 229 | 653 | 48 | 469 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002324801.1 | 0 | 269 | 652 | 13 | 395 | predicted protein [Populus trichocarpa] |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
xylogalacturonan biosynthesis | RXN-9589 | EC-2.4.2.41 | xylogalacturonan β-1,3-xylosyltransferase |