| Basic Information | |
|---|---|
| Species | Arabidopsis thaliana |
| Cazyme ID | AT5G26120.1 |
| Family | GH51 |
| Protein Properties | Length: 675 Molecular Weight: 75439.1 Isoelectric Point: 4.7746 |
| Chromosome | Chromosome/Scaffold: 5 Start: 9121727 End: 9125967 |
| Description | alpha-N-arabinofuranosidase A, putative, expressed |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GH51 | 215 | 660 | 0 |
| GARLQFTTTKKGSIWFDQVSAMPMDTYKGHGFRNDLFQMMVDLKPRFIRFPGGCFVEGDWLGNAFRWKETVRAWEERPGHYGDVWKYWTDDGLGHFEFFQ LAEDLGASPIWVFNNGISHNDQVETKNVMPFVQEAIDGIEFARGDSNSTWGSVRAAMGHPEPFELKYVAVGNEDCFKSYYRGNYLEFYNAIKKAYPDIKI ISNCDASAKPLDHPADYFDYHIYTLARDLFSKSHDFDNTPRNGPKAFVSEYAVNKADAKNGNLLAALGEAAFLLGLEKNSDIVEMVSYAPLFVNTNDRRW IPDAIVFNSSHLYGTPSYWVQHFFTESSGATLLNSTLKGKTSSVEASAISFQTNGKDYIQIKAVNFGEQSVNLKVAVTGLMAKFYGSKKKVLTSASVMDE NSFSNPNMIVPQESLLEMTEQEDLMFVLPPHSFSSFDLLTESENVI | |||
| Full Sequence |
|---|
| Protein Sequence Length: 675 Download |
| MDMETSWRFL RSVCLLSFIL GSFSVYQTLC LVDAQEDAIV TLQVDASNVT RRPIPETLFG 60 IFFEEINHAG AGGLWAELVS NRGFEAGGQI IPSNIWPWSI IGDESSIYVV TDRSSCFERN 120 KIALRMEVLC DSNSCPLGGV GVYNPGYWGM NIEEGKKYKV VLYVRSTGDI DVSVSFTSSN 180 GSVTLASENI IALASDLLNW TKKEMLLEAN GTDNGARLQF TTTKKGSIWF DQVSAMPMDT 240 YKGHGFRNDL FQMMVDLKPR FIRFPGGCFV EGDWLGNAFR WKETVRAWEE RPGHYGDVWK 300 YWTDDGLGHF EFFQLAEDLG ASPIWVFNNG ISHNDQVETK NVMPFVQEAI DGIEFARGDS 360 NSTWGSVRAA MGHPEPFELK YVAVGNEDCF KSYYRGNYLE FYNAIKKAYP DIKIISNCDA 420 SAKPLDHPAD YFDYHIYTLA RDLFSKSHDF DNTPRNGPKA FVSEYAVNKA DAKNGNLLAA 480 LGEAAFLLGL EKNSDIVEMV SYAPLFVNTN DRRWIPDAIV FNSSHLYGTP SYWVQHFFTE 540 SSGATLLNST LKGKTSSVEA SAISFQTNGK DYIQIKAVNF GEQSVNLKVA VTGLMAKFYG 600 SKKKVLTSAS VMDENSFSNP NMIVPQESLL EMTEQEDLMF VLPPHSFSSF DLLTESENVI 660 KMPISDSYKK TSTM* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG3534 | AbfA | 0.003 | 529 | 648 | 132 | + Alpha-L-arabinofuranosidase [Carbohydrate transport and metabolism] | ||
| COG3534 | AbfA | 1.0e-27 | 245 | 387 | 143 | + Alpha-L-arabinofuranosidase [Carbohydrate transport and metabolism] | ||
| pfam06964 | Alpha-L-AF_C | 4.0e-34 | 493 | 646 | 163 | + Alpha-L-arabinofuranosidase C-terminus. This family represents the C-terminus (approximately 200 residues) of bacterial and eukaryotic alpha-L-arabinofuranosidase (EC:3.2.1.55). This catalyzes the hydrolysis of nonreducing terminal alpha-L-arabinofuranosidic linkages in L-arabinose-containing polysaccharides. | ||
| smart00813 | Alpha-L-AF_C | 1.0e-42 | 493 | 646 | 161 | + Alpha-L-arabinofuranosidase C-terminus. This entry represents the C terminus (approximately 200 residues) of bacterial and eukaryotic alpha-L-arabinofuranosidase. This catalyses the hydrolysis of non-reducing terminal alpha-L-arabinofuranosidic linkages in L-arabinose-containing polysaccharides. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0012505 | endomembrane system |
| GO:0016798 | hydrolase activity, acting on glycosyl bonds |
| GO:0046373 | L-arabinose metabolic process |
| GO:0046556 | alpha-N-arabinofuranosidase activity |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAD40132.1 | 0 | 126 | 674 | 1 | 521 | AF149413_13 contains similarity to arabinosidase [Arabidopsis thaliana] |
| GenBank | AAK50089.1 | 0 | 1 | 674 | 1 | 678 | AF372949_1 AT3g10740/T7M13_18 [Arabidopsis thaliana] |
| GenBank | AAO92261.1 | 0 | 1 | 674 | 1 | 678 | alpha-L-arabinofuranosidase [Arabidopsis thaliana] |
| RefSeq | NP_187685.1 | 0 | 1 | 674 | 1 | 678 | ASD1 (ALPHA-L-ARABINOFURANOSIDASE 1); alpha-N-arabinofuranosidase/ hydrolase, acting on glycosyl bonds / xylan 1,4-beta-xylosidase [Arabidopsis thaliana] |
| RefSeq | NP_197984.2 | 0 | 1 | 674 | 1 | 674 | ASD2 (ALPHA-L-ARABINOFURANOSIDASE 2); alpha-N-arabinofuranosidase/ hydrolase, acting on glycosyl bonds [Arabidopsis thaliana] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3s2c_L | 4e-19 | 244 | 650 | 47 | 474 | A Chain A, Structure Of The Thermostable Gh51 Alpha-L-Arabinofuranosidase From Thermotoga Petrophila Rku-1 |
| PDB | 3s2c_K | 4e-19 | 244 | 650 | 47 | 474 | A Chain A, Structure Of The Thermostable Gh51 Alpha-L-Arabinofuranosidase From Thermotoga Petrophila Rku-1 |
| PDB | 3s2c_J | 4e-19 | 244 | 650 | 47 | 474 | A Chain A, Structure Of The Thermostable Gh51 Alpha-L-Arabinofuranosidase From Thermotoga Petrophila Rku-1 |
| PDB | 3s2c_I | 4e-19 | 244 | 650 | 47 | 474 | A Chain A, Structure Of The Thermostable Gh51 Alpha-L-Arabinofuranosidase From Thermotoga Petrophila Rku-1 |
| PDB | 3s2c_H | 4e-19 | 244 | 650 | 47 | 474 | A Chain A, Structure Of The Thermostable Gh51 Alpha-L-Arabinofuranosidase From Thermotoga Petrophila Rku-1 |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
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| Hit | Length | Start | End | EValue |
| JG577027 | 333 | 102 | 434 | 0 |
| HO852683 | 414 | 245 | 652 | 0 |
| BX841311 | 334 | 1 | 332 | 0 |
| HO807291 | 316 | 152 | 467 | 0 |
| HO780740 | 409 | 273 | 675 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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