| Basic Information | |
|---|---|
| Species | Arabidopsis thaliana |
| Cazyme ID | AT5G26810.1 |
| Family | CE8 |
| Protein Properties | Length: 294 Molecular Weight: 32350.4 Isoelectric Point: 6.7024 |
| Chromosome | Chromosome/Scaffold: 5 Start: 9430952 End: 9432969 |
| Description | pectinesterase, putative, expressed |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CE8 | 42 | 282 | 0 |
| GEGQRVTTITYNGHAATDVSSTFTSYPSHIVVRNLSIMNTYNRLTSLTKANGMSWDIKPAVAISVYGDKSAFYNCDFLGLQDTVWDNLGRHHFKNCYIEG AIDFIFGSGQSVYEDCHINATAGALASKVSFGYITAQGRSSDSDPSGFVFLRGSVSGSTSVYLGRAYGPFSRVIFIQTDLSSVVHPEGWYSWHYGGYEMS FTYAEVECKGAGSDMSRRVPWIDKLHSFYTKQQFSISNFID | |||
| Full Sequence |
|---|
| Protein Sequence Length: 294 Download |
| MPCLFIFIAL LLSSCIGTLK ALDQTCGNKV VNTIVVDQAG SGEGQRVTTI TYNGHAATDV 60 SSTFTSYPSH IVVRNLSIMN TYNRLTSLTK ANGMSWDIKP AVAISVYGDK SAFYNCDFLG 120 LQDTVWDNLG RHHFKNCYIE GAIDFIFGSG QSVYEDCHIN ATAGALASKV SFGYITAQGR 180 SSDSDPSGFV FLRGSVSGST SVYLGRAYGP FSRVIFIQTD LSSVVHPEGW YSWHYGGYEM 240 SFTYAEVECK GAGSDMSRRV PWIDKLHSFY TKQQFSISNF IDQDQWISNI PRF* 300 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02665 | PLN02665 | 7.0e-58 | 48 | 293 | 257 | + pectinesterase family protein | ||
| PLN02304 | PLN02304 | 6.0e-58 | 42 | 287 | 252 | + probable pectinesterase | ||
| PLN02682 | PLN02682 | 3.0e-64 | 42 | 289 | 258 | + pectinesterase family protein | ||
| PLN02176 | PLN02176 | 2.0e-73 | 42 | 291 | 250 | + putative pectinesterase | ||
| PLN02497 | PLN02497 | 8.0e-84 | 42 | 291 | 250 | + probable pectinesterase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005618 | cell wall |
| GO:0009505 | plant-type cell wall |
| GO:0012505 | endomembrane system |
| GO:0030599 | pectinesterase activity |
| GO:0042545 | cell wall modification |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAB61046.1 | 0 | 1 | 293 | 1 | 244 | Similar to pectinesterase; F2P16.5 [Arabidopsis thaliana] |
| RefSeq | NP_198033.2 | 0 | 1 | 293 | 1 | 293 | pectinesterase family protein [Arabidopsis thaliana] |
| RefSeq | XP_002318946.1 | 0 | 41 | 291 | 92 | 338 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002330032.1 | 0 | 2 | 291 | 4 | 323 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002529267.1 | 0 | 41 | 291 | 93 | 337 | Pectinesterase-2 precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1gq8_A | 3e-29 | 101 | 287 | 114 | 308 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 1xg2_A | 3e-19 | 17 | 262 | 40 | 277 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 3uw0_A | 0.000000000004 | 58 | 269 | 111 | 352 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
| PDB | 1qjv_B | 0.00000000006 | 61 | 230 | 88 | 279 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
| PDB | 1qjv_A | 0.00000000006 | 61 | 230 | 88 | 279 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| homogalacturonan degradation | RXN-2102 | EC-3.1.1.11 | pectinesterase |
