y
Basic Information | |
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Species | Arabidopsis thaliana |
Cazyme ID | AT5G42720.1 |
Family | GH17 |
Protein Properties | Length: 439 Molecular Weight: 47169 Isoelectric Point: 7.1252 |
Chromosome | Chromosome/Scaffold: 5 Start: 17130186 End: 17132843 |
Description | glucan endo-1,3-beta-glucosidase precursor, putative, expressed |
View CDS |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH17 | 26 | 344 | 0 |
LGVNYGLTADNLPPPSASAKLLQSTTFQKVRLYGSDPAVIKALANTGIEIVIGASNGDVPGLASDPSFARSWVETNVVPYYPASKIVLIAVGNEITSFGD NSLMSQLLPAMKNVQTALEAASLGGGKIKVSTVHIMSVLAGSDPPSTAVFKPEHADILKGLLEFNSETGSPFAVNPYPFFAYQDDRRPETLAYCLFQANP GRVDPNSNLKYMNMFDAQVDAVYSALNSMGFKDVEIMVAETGWPYKGDPEEAGATVENARAYNKNLIAHLKSGSGTPLMPGRVIDTYLFALYDENLKPGK GSERAFGLFRPDLTMTYDI |
Full Sequence |
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Protein Sequence Length: 439 Download |
MRASVYSLIL LFFSCLLHLS KSQPFLGVNY GLTADNLPPP SASAKLLQST TFQKVRLYGS 60 DPAVIKALAN TGIEIVIGAS NGDVPGLASD PSFARSWVET NVVPYYPASK IVLIAVGNEI 120 TSFGDNSLMS QLLPAMKNVQ TALEAASLGG GKIKVSTVHI MSVLAGSDPP STAVFKPEHA 180 DILKGLLEFN SETGSPFAVN PYPFFAYQDD RRPETLAYCL FQANPGRVDP NSNLKYMNMF 240 DAQVDAVYSA LNSMGFKDVE IMVAETGWPY KGDPEEAGAT VENARAYNKN LIAHLKSGSG 300 TPLMPGRVID TYLFALYDEN LKPGKGSERA FGLFRPDLTM TYDIGLTKTT NYNQTSMAPL 360 SPTRPRLPPA AAPTRQTLPS PPQMILPSPV TPSDKNSGQT DVHNSTPRSA SLAHICRSLS 420 ISASMFFVSV LYALIILL* 480 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 4.0e-8 | 25 | 337 | 328 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam00332 | Glyco_hydro_17 | 2.0e-99 | 26 | 344 | 319 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0003824 | catalytic activity |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
GO:0031225 | anchored to membrane |
GO:0043169 | cation binding |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
DDBJ | BAB10628.1 | 0 | 1 | 331 | 1 | 331 | beta-1,3-glucanase-like protein [Arabidopsis thaliana] |
RefSeq | NP_199086.2 | 0 | 1 | 418 | 1 | 418 | glycosyl hydrolase family 17 protein [Arabidopsis thaliana] |
RefSeq | XP_002282736.1 | 0 | 3 | 385 | 7 | 384 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002301872.1 | 0 | 22 | 350 | 1 | 328 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002510373.1 | 0 | 1 | 373 | 5 | 366 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3ur8_B | 0 | 23 | 347 | 1 | 315 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 |
PDB | 3ur8_A | 0 | 23 | 347 | 1 | 315 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 |
PDB | 3ur7_B | 0 | 23 | 347 | 1 | 315 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
PDB | 3ur7_A | 0 | 23 | 347 | 1 | 315 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
PDB | 4gzj_A | 0 | 23 | 347 | 1 | 315 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |