| Basic Information | |
|---|---|
| Species | Arabidopsis thaliana |
| Cazyme ID | AT5G45300.1 |
| Family | GH14 |
| Protein Properties | Length: 690 Molecular Weight: 77160.5 Isoelectric Point: 6.1092 |
| Chromosome | Chromosome/Scaffold: 5 Start: 18353613 End: 18356874 |
| Description | beta-amylase, putative, expressed |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH14 | 258 | 658 | 0 |
| YAMLPVGIIDNFGQLVDPEGVRQELSYMKSLNVDGVVIDCWWGIVEGWNPQKYVWSGYRELFNLIRDFKLKLQVVMAFHEYGGNASGNVMISLPQWVLKI GKDNPDIFFTDREGRRSFECLNWSIDKERVLHGRTGIEVYFDFMRSFRSEFDDLFVEGLITAVEIGLGASGELKYPSFPERMGWIYPGIGEFQCYDKYSQ LSLQKEAKSRGFTFWGKGPENAGQYSSHPHETVFFQERGEYDSYYGRFFLNWYSQLLIGHAENVLSLANLAFEETKIIVKIPAIYWSYKTASHAAELTAG YYNPSNRDGYSLVFETLKKYSVTVKFVCPGPQMSPNAHEEALADPEGLSWQVINAAWDKGLQIGGENAITCFDRDGCMRLIDIAKPRNHPDGYHFSFFTY R | |||
| Full Sequence |
|---|
| Protein Sequence Length: 690 Download |
| MHTLNNTITT TTGSQDPNLD PIPDPDQFPN RNRNQPQSRR PRGFAAAAAA ASIAPTENDV 60 NNGNIAGIGG GEGSSGGGGG GGGKGKRERE KEKERTKLRE RHRRAITSRM LAGLRQYGNF 120 PLPARADMND VIAALAREAG WSVEADGTTY RQSQQPNHVV QFPTRSIESP LSSSTLKNCA 180 KAAIESQQHS VLRNDEKLAP VSLDSIGIAE SDHPGNGRYT SVSPITSVGC LEANQLIQDV 240 HSAEQCNDFT ESFYVPVYAM LPVGIIDNFG QLVDPEGVRQ ELSYMKSLNV DGVVIDCWWG 300 IVEGWNPQKY VWSGYRELFN LIRDFKLKLQ VVMAFHEYGG NASGNVMISL PQWVLKIGKD 360 NPDIFFTDRE GRRSFECLNW SIDKERVLHG RTGIEVYFDF MRSFRSEFDD LFVEGLITAV 420 EIGLGASGEL KYPSFPERMG WIYPGIGEFQ CYDKYSQLSL QKEAKSRGFT FWGKGPENAG 480 QYSSHPHETV FFQERGEYDS YYGRFFLNWY SQLLIGHAEN VLSLANLAFE ETKIIVKIPA 540 IYWSYKTASH AAELTAGYYN PSNRDGYSLV FETLKKYSVT VKFVCPGPQM SPNAHEEALA 600 DPEGLSWQVI NAAWDKGLQI GGENAITCFD RDGCMRLIDI AKPRNHPDGY HFSFFTYRQP 660 SPLVQGSTCF PDLDYFIKRM HGDIRDKQF* 720 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN00197 | PLN00197 | 4.0e-103 | 255 | 630 | 384 | + beta-amylase; Provisional | ||
| PLN02803 | PLN02803 | 2.0e-117 | 255 | 657 | 408 | + beta-amylase | ||
| PLN02801 | PLN02801 | 4.0e-142 | 254 | 683 | 436 | + beta-amylase | ||
| PLN02705 | PLN02705 | 0 | 1 | 689 | 689 | + beta-amylase | ||
| PLN02905 | PLN02905 | 0 | 105 | 683 | 609 | + beta-amylase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0000272 | polysaccharide catabolic process |
| GO:0003824 | catalytic activity |
| GO:0005575 | cellular_component |
| GO:0005975 | carbohydrate metabolic process |
| GO:0016161 | beta-amylase activity |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CBI29216.1 | 0 | 96 | 684 | 19 | 606 | unnamed protein product [Vitis vinifera] |
| RefSeq | NP_001032014.1 | 0 | 1 | 689 | 1 | 687 | BMY2 (BETA-AMYLASE 2); beta-amylase/ catalytic/ cation binding [Arabidopsis thaliana] |
| RefSeq | NP_199343.1 | 0 | 1 | 689 | 1 | 689 | BMY2 (BETA-AMYLASE 2); beta-amylase/ catalytic/ cation binding [Arabidopsis thaliana] |
| RefSeq | XP_002270680.1 | 0 | 89 | 684 | 70 | 664 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002304400.1 | 0 | 14 | 682 | 17 | 666 | predicted protein [Populus trichocarpa] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1wdq_A | 0 | 254 | 683 | 11 | 444 | A Chain A, The Role Of An Inner Loop In The Catalytic Mechanism Of Soybean Beta-Amylase |
| PDB | 1fa2_A | 0 | 254 | 684 | 12 | 447 | A Chain A, Crystal Structure Of Beta-Amylase From Sweet Potato |
| PDB | 1wds_A | 0 | 254 | 683 | 11 | 444 | A Chain A, The Role Of An Inner Loop In The Catalytic Mechanism Of Soybean Beta- Amylase |
| PDB | 1byd_A | 0 | 254 | 683 | 11 | 444 | A Chain A, The Role Of An Inner Loop In The Catalytic Mechanism Of Soybean Beta- Amylase |
| PDB | 1byc_A | 0 | 254 | 683 | 11 | 444 | A Chain A, The Role Of An Inner Loop In The Catalytic Mechanism Of Soybean Beta- Amylase |
| Hydropathy |
|---|
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| EB439624 | 285 | 301 | 585 | 0 |
| JG649066 | 276 | 299 | 574 | 0 |
| GO367915 | 286 | 266 | 551 | 0 |
| DK480952 | 180 | 263 | 442 | 0 |
| DK480952 | 102 | 160 | 260 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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