| Basic Information | |
|---|---|
| Species | Arabidopsis thaliana |
| Cazyme ID | AT5G45300.2 |
| Family | GH14 |
| Protein Properties | Length: 688 Molecular Weight: 76933.2 Isoelectric Point: 6.1092 |
| Chromosome | Chromosome/Scaffold: 5 Start: 18353608 End: 18356875 |
| Description | beta-amylase, putative, expressed |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH14 | 256 | 656 | 0 |
| YAMLPVGIIDNFGQLVDPEGVRQELSYMKSLNVDGVVIDCWWGIVEGWNPQKYVWSGYRELFNLIRDFKLKLQVVMAFHEYGGNASGNVMISLPQWVLKI GKDNPDIFFTDREGRRSFECLNWSIDKERVLHGRTGIEVYFDFMRSFRSEFDDLFVEGLITAVEIGLGASGELKYPSFPERMGWIYPGIGEFQCYDKYSQ LSLQKEAKSRGFTFWGKGPENAGQYSSHPHETVFFQERGEYDSYYGRFFLNWYSQLLIGHAENVLSLANLAFEETKIIVKIPAIYWSYKTASHAAELTAG YYNPSNRDGYSLVFETLKKYSVTVKFVCPGPQMSPNAHEEALADPEGLSWQVINAAWDKGLQIGGENAITCFDRDGCMRLIDIAKPRNHPDGYHFSFFTY R | |||
| Full Sequence |
|---|
| Protein Sequence Length: 688 Download |
| MHTLNNTITT TTGSQDPNLD PIPDPDQFPN RNRNQPQSRR PRGFAAAAAA ASIAPTENDV 60 NNGNIAGIGG GEGSSGGGGG GGGKGKRERE KEKERTKLRE RHRRAITSRM LAGLRQYGNF 120 PLPARADMND VIAALAREAG WSVEADGTTY RQSQQPNHVF PTRSIESPLS SSTLKNCAKA 180 AIESQQHSVL RNDEKLAPVS LDSIGIAESD HPGNGRYTSV SPITSVGCLE ANQLIQDVHS 240 AEQCNDFTES FYVPVYAMLP VGIIDNFGQL VDPEGVRQEL SYMKSLNVDG VVIDCWWGIV 300 EGWNPQKYVW SGYRELFNLI RDFKLKLQVV MAFHEYGGNA SGNVMISLPQ WVLKIGKDNP 360 DIFFTDREGR RSFECLNWSI DKERVLHGRT GIEVYFDFMR SFRSEFDDLF VEGLITAVEI 420 GLGASGELKY PSFPERMGWI YPGIGEFQCY DKYSQLSLQK EAKSRGFTFW GKGPENAGQY 480 SSHPHETVFF QERGEYDSYY GRFFLNWYSQ LLIGHAENVL SLANLAFEET KIIVKIPAIY 540 WSYKTASHAA ELTAGYYNPS NRDGYSLVFE TLKKYSVTVK FVCPGPQMSP NAHEEALADP 600 EGLSWQVINA AWDKGLQIGG ENAITCFDRD GCMRLIDIAK PRNHPDGYHF SFFTYRQPSP 660 LVQGSTCFPD LDYFIKRMHG DIRDKQF* 720 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN00197 | PLN00197 | 4.0e-103 | 253 | 628 | 384 | + beta-amylase; Provisional | ||
| PLN02803 | PLN02803 | 2.0e-117 | 253 | 655 | 408 | + beta-amylase | ||
| PLN02801 | PLN02801 | 5.0e-142 | 252 | 681 | 436 | + beta-amylase | ||
| PLN02705 | PLN02705 | 0 | 1 | 687 | 689 | + beta-amylase | ||
| PLN02905 | PLN02905 | 0 | 105 | 681 | 598 | + beta-amylase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0000272 | polysaccharide catabolic process |
| GO:0003824 | catalytic activity |
| GO:0005575 | cellular_component |
| GO:0005975 | carbohydrate metabolic process |
| GO:0016161 | beta-amylase activity |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CBI29216.1 | 0 | 96 | 682 | 19 | 606 | unnamed protein product [Vitis vinifera] |
| RefSeq | NP_001032014.1 | 0 | 1 | 687 | 1 | 687 | BMY2 (BETA-AMYLASE 2); beta-amylase/ catalytic/ cation binding [Arabidopsis thaliana] |
| RefSeq | NP_199343.1 | 0 | 1 | 687 | 1 | 689 | BMY2 (BETA-AMYLASE 2); beta-amylase/ catalytic/ cation binding [Arabidopsis thaliana] |
| RefSeq | XP_002270680.1 | 0 | 89 | 682 | 70 | 664 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002304400.1 | 0 | 14 | 680 | 17 | 666 | predicted protein [Populus trichocarpa] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1wdq_A | 0 | 252 | 681 | 11 | 444 | A Chain A, The Role Of An Inner Loop In The Catalytic Mechanism Of Soybean Beta-Amylase |
| PDB | 1wdp_A | 0 | 252 | 681 | 11 | 444 | A Chain A, The Role Of An Inner Loop In The Catalytic Mechanism Of Soybean Beta-Amylase |
| PDB | 1q6c_A | 0 | 252 | 681 | 11 | 444 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Complexed With Maltose |
| PDB | 1bfn_A | 0 | 252 | 681 | 11 | 444 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Complexed With Maltose |
| PDB | 1byd_A | 0 | 252 | 681 | 11 | 444 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Complexed With Maltose |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| starch degradation I | RXN-1827 | EC-3.2.1.2 | β-amylase |
| Hydropathy |
|---|
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| EB439624 | 285 | 299 | 583 | 0 |
| JG649066 | 276 | 297 | 572 | 0 |
| GO367915 | 286 | 264 | 549 | 0 |
| DK480952 | 180 | 261 | 440 | 0 |
| DK480952 | 100 | 160 | 258 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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