y
Basic Information | |
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Species | Arabidopsis thaliana |
Cazyme ID | AT5G49360.1 |
Family | GH3 |
Protein Properties | Length: 775 Molecular Weight: 83523.5 Isoelectric Point: 8.6137 |
Chromosome | Chromosome/Scaffold: 5 Start: 20011879 End: 20016742 |
Description | glycosyl hydrolase family 3 protein, putative, expressed |
View CDS |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH3 | 81 | 329 | 0 |
AAVPRLGIGGYEWWSEALHGISDVGPGAKFGGAFPGATSFPQVITTAASFNQSLWEEIGRVVSDEARAMYNGGVAGLTYWSPNVNILRDPRWGRGQETPG EDPIVAAKYAASYVRGLQGTAAGNRLKVAACCKHYTAYDLDNWNGVDRFHFNAKVTQQDLEDTYNVPFKSCVYEGKVASVMCSYNQVNGKPTCADENLLK NTIRGQWRLNGYIVSDCDSVDVFFNQQHYTSTPEEAAARSIKAGLDLDC |
Full Sequence |
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Protein Sequence Length: 775 Download |
MSCYNKALLI GNKVVVILVF LLCLVHSSES LRPLFACDPA NGLTRTLRFC RANVPIHVRV 60 QDLLGRLTLQ EKIRNLVNNA AAVPRLGIGG YEWWSEALHG ISDVGPGAKF GGAFPGATSF 120 PQVITTAASF NQSLWEEIGR VVSDEARAMY NGGVAGLTYW SPNVNILRDP RWGRGQETPG 180 EDPIVAAKYA ASYVRGLQGT AAGNRLKVAA CCKHYTAYDL DNWNGVDRFH FNAKVTQQDL 240 EDTYNVPFKS CVYEGKVASV MCSYNQVNGK PTCADENLLK NTIRGQWRLN GYIVSDCDSV 300 DVFFNQQHYT STPEEAAARS IKAGLDLDCG PFLAIFTEGA VKKGLLTEND INLALANTLT 360 VQMRLGMFDG NLGPYANLGP RDVCTPAHKH LALEAAHQGI VLLKNSARSL PLSPRRHRTV 420 AVIGPNSDVT ETMIGNYAGK ACAYTSPLQG ISRYARTLHQ AGCAGVACKG NQGFGAAEAA 480 AREADATVLV MGLDQSIEAE TRDRTGLLLP GYQQDLVTRV AQASRGPVIL VLMSGGPIDV 540 TFAKNDPRVA AIIWAGYPGQ AGGAAIANII FGAANPGGKL PMTWYPQDYV AKVPMTVMAM 600 RASGNYPGRT YRFYKGPVVF PFGFGLSYTT FTHSLAKSPL AQLSVSLSNL NSANTILNSS 660 SHSIKVSHTN CNSFPKMPLH VEVSNTGEFD GTHTVFVFAE PPINGIKGLG VNKQLIAFEK 720 VHVMAGAKQT VQVDVDACKH LGVVDEYGKR RIPMGEHKLH IGDLKHTILV QPQL* 780 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam01915 | Glyco_hydro_3_C | 2.0e-41 | 400 | 630 | 237 | + Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933. | ||
COG1472 | BglX | 6.0e-52 | 71 | 451 | 386 | + Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] | ||
pfam00933 | Glyco_hydro_3 | 6.0e-61 | 71 | 361 | 294 | + Glycosyl hydrolase family 3 N terminal domain. | ||
PRK15098 | PRK15098 | 2.0e-61 | 118 | 739 | 671 | + beta-D-glucoside glucohydrolase; Provisional | ||
PLN03080 | PLN03080 | 0 | 27 | 771 | 771 | + Probable beta-xylosidase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
GO:0009505 | plant-type cell wall |
GO:0010214 | seed coat development |
GO:0046556 | alpha-N-arabinofuranosidase activity |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAS17751.2 | 0 | 2 | 771 | 3 | 764 | beta xylosidase [Fragaria x ananassa] |
DDBJ | BAG28345.1 | 0 | 29 | 753 | 23 | 743 | arabinofuranosidase [Citrus unshiu] |
RefSeq | NP_199747.1 | 0 | 1 | 774 | 1 | 774 | BXL1 (BETA-XYLOSIDASE 1); hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] |
RefSeq | XP_002316021.1 | 0 | 26 | 774 | 20 | 763 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002519194.1 | 0 | 26 | 774 | 34 | 777 | Periplasmic beta-glucosidase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3u48_B | 0 | 118 | 735 | 91 | 696 | A Chain A, Structure Of Endo-Beta-N-Acetylglucosaminidase A |
PDB | 3u48_A | 0 | 118 | 735 | 91 | 696 | A Chain A, Structure Of Endo-Beta-N-Acetylglucosaminidase A |
PDB | 3u4a_B | 0 | 118 | 735 | 91 | 696 | A Chain A, Structure Of Endo-Beta-N-Acetylglucosaminidase A |
PDB | 3u4a_A | 0 | 118 | 735 | 91 | 696 | A Chain A, Structure Of Endo-Beta-N-Acetylglucosaminidase A |
PDB | 2x41_A | 3e-39 | 59 | 634 | 3 | 606 | A Chain A, Structure Of Endo-Beta-N-Acetylglucosaminidase A |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
(1,4)-β-xylan degradation | 3.2.1.37-RXN | EC-3.2.1.37 | xylan 1,4-β-xylosidase |