| Basic Information | |
|---|---|
| Species | Arabidopsis thaliana |
| Cazyme ID | AT5G51950.2 |
| Family | AA3 |
| Protein Properties | Length: 554 Molecular Weight: 60891.4 Isoelectric Point: 6.8887 |
| Chromosome | Chromosome/Scaffold: 5 Start: 21105909 End: 21108605 |
| Description | HOTHEAD precursor, putative, expressed |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| AA3 | 11 | 544 | 0 |
| ARFDYIIIGGGTSGCALAATLSQNASVLVLERGGAPYDNPTATDIENFATTLSNTSPKSWSQLFISEDGVYNTRARVLGGGSVLNAGFYTRAGDEYVKET EWKTDEVEAAYEWVEKKVAFQPPVLGWQTAFKDGLLEAGEFPYNGFTYDHIYGTKIGGTIFDRAGHRHTAADLLEYANPGNIVVYLHASVHKILFTTKGR PRPKAYGVIFQDANGVLHKAELEKNSMNEVILSAGAIGSPQLLMLSGIGPAAHLAAHGIKPLVLDHPMVGQGMGDNPMNAIFIPSPTPVEVSLIQVVGIT KFESYIEGASGVIFSYSWTRRFFDGVLNYLNEMQTSRTTSTTSPTLSTQSITDFFNPINPLLNATTRAGLILQKIAGPISRGHLELRNTNPDDNPSVRFN YYQEPEDLQICVEGINTIIKVINSKAFSKFKYPDATIHGLLDLMLSVPTNLRPRHITSMFNLRQFCIDTVMTIWHYHGGCQVGRVVDKNYRVLGIDSLRV IDGSTFLKSPGTNPQATVMMLGRYMGQRILQERE | |||
| Full Sequence |
|---|
| Protein Sequence Length: 554 Download |
| MKDATLAPMF ARFDYIIIGG GTSGCALAAT LSQNASVLVL ERGGAPYDNP TATDIENFAT 60 TLSNTSPKSW SQLFISEDGV YNTRARVLGG GSVLNAGFYT RAGDEYVKET EWKTDEVEAA 120 YEWVEKKVAF QPPVLGWQTA FKDGLLEAGE FPYNGFTYDH IYGTKIGGTI FDRAGHRHTA 180 ADLLEYANPG NIVVYLHASV HKILFTTKGR PRPKAYGVIF QDANGVLHKA ELEKNSMNEV 240 ILSAGAIGSP QLLMLSGIGP AAHLAAHGIK PLVLDHPMVG QGMGDNPMNA IFIPSPTPVE 300 VSLIQVVGIT KFESYIEGAS GVIFSYSWTR RFFDGVLNYL NEMQTSRTTS TTSPTLSTQS 360 ITDFFNPINP LLNATTRAGL ILQKIAGPIS RGHLELRNTN PDDNPSVRFN YYQEPEDLQI 420 CVEGINTIIK VINSKAFSKF KYPDATIHGL LDLMLSVPTN LRPRHITSMF NLRQFCIDTV 480 MTIWHYHGGC QVGRVVDKNY RVLGIDSLRV IDGSTFLKSP GTNPQATVMM LGRYMGQRIL 540 QEREIYNKPD KEA* 600 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PRK02106 | PRK02106 | 6.0e-13 | 388 | 540 | 158 | + choline dehydrogenase; Validated | ||
| TIGR03970 | Rv0697 | 2.0e-26 | 14 | 287 | 317 | + dehydrogenase, Rv0697 family. This model describes a set of dehydrogenases belonging to the glucose-methanol-choline oxidoreductase (GMC oxidoreductase) family. Members of the present family are restricted to Actinobacterial genome contexts containing also members of families TIGR03962 and TIGR03969 (the mycofactocin system), and are proposed to be uniform in function. | ||
| PRK02106 | PRK02106 | 1.0e-30 | 12 | 285 | 331 | + choline dehydrogenase; Validated | ||
| COG2303 | BetA | 4.0e-46 | 7 | 543 | 587 | + Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism] | ||
| PLN02785 | PLN02785 | 0 | 13 | 543 | 533 | + Protein HOTHEAD | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0009651 | response to salt stress |
| GO:0012505 | endomembrane system |
| GO:0016614 | oxidoreductase activity, acting on CH-OH group of donors |
| GO:0016832 | aldehyde-lyase activity |
| GO:0050660 | flavin adenine dinucleotide binding |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| DDBJ | BAB11043.1 | 0 | 1 | 533 | 34 | 563 | mandelonitrile lyase-like protein [Arabidopsis thaliana] |
| EMBL | CAB87405.1 | 0 | 1 | 533 | 34 | 557 | ADHESION OF CALYX EDGES-like protein [Arabidopsis thaliana] |
| RefSeq | NP_001119417.1 | 0 | 1 | 553 | 1 | 553 | glucose-methanol-choline (GMC) oxidoreductase family protein [Arabidopsis thaliana] |
| RefSeq | NP_200008.1 | 0 | 1 | 553 | 34 | 586 | glucose-methanol-choline (GMC) oxidoreductase family protein [Arabidopsis thaliana] |
| RefSeq | NP_567032.1 | 0 | 1 | 552 | 34 | 576 | glucose-methanol-choline (GMC) oxidoreductase family protein [Arabidopsis thaliana] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3gdp_B | 0 | 3 | 543 | 17 | 517 | A Chain A, Crystal Structure Of The Hydroxynitrile Lyase From Almond |
| PDB | 3gdp_A | 0 | 3 | 543 | 17 | 517 | A Chain A, Crystal Structure Of The Hydroxynitrile Lyase From Almond |
| PDB | 3gdn_B | 0 | 3 | 543 | 17 | 517 | A Chain A, Almond Hydroxynitrile Lyase In Complex With Benzaldehyde |
| PDB | 3gdn_A | 0 | 3 | 543 | 17 | 517 | A Chain A, Almond Hydroxynitrile Lyase In Complex With Benzaldehyde |
| PDB | 1ju2_B | 0 | 3 | 543 | 17 | 517 | A Chain A, Crystal Structure Of The Hydroxynitrile Lyase From Almond |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| cutin biosynthesis | RXN-2121 | EC-1.1.1 | 18-hydroxyoleate dehydrogenase |
| cutin biosynthesis | RXN-9802 | EC-1.1.1 | 16-hydroxypalmitate dehydrogenase |
| suberin biosynthesis | RXN-2121 | EC-1.1.1 | 18-hydroxyoleate dehydrogenase |
| Hydropathy |
|---|
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| HO796743 | 532 | 14 | 543 | 0 |
| EX050677 | 249 | 57 | 305 | 0 |
| CK121004 | 215 | 1 | 215 | 0 |
| EV159152 | 231 | 95 | 325 | 0 |
| EX903828 | 239 | 140 | 378 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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