Basic Information | |
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Species | Arabidopsis thaliana |
Cazyme ID | AT5G53370.1 |
Family | CE8 |
Protein Properties | Length: 588 Molecular Weight: 64241.1 Isoelectric Point: 7.7153 |
Chromosome | Chromosome/Scaffold: 5 Start: 21649532 End: 21651593 |
Description | pectinesterase, putative, expressed |
View CDS |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 273 | 570 | 0 |
DITVSKDGSGTFKTIAEAIKKAPEHSSRRFVIYVKAGRYEEENLKVGRKKTNLMFIGDGKGKTVITGGKSIADDLTTFHTATFAATGAGFIVRDMTFENY AGPAKHQAVALRVGGDHAVVYRCNIIGYQDALYVHSNRQFFRECEIYGTVDFIFGNAAVILQSCNIYARKPMAQQKITITAQNRKDPNQNTGISIHACKL LATPDLEASKGSYPTYLGRPWKLYSRVVYMMSDMGDHIDPRGWLEWNGPFALDSLYYGEYMNKGLGSGIGQRVKWPGYHVITSTVEASKFTVAQFISG |
Full Sequence |
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Protein Sequence Length: 588 Download |
MGYDRLGPSG PSNPNQKDPA TSLPELQKKT KTKLILFTLA VLVVGVVCFG IFAGIRAVDS 60 GKTEPKLTRK PTQAISRTCS KSLYPNLCID TLLDFPGSLT ADENELIHIS FNATLQKFSK 120 ALYTSSTITY TQMPPRVRSA YDSCLELLDD SVDALTRALS SVVVVSGDES HSDVMTWLSS 180 AMTNHDTCTD GFDEIEGQGG EVKDQVIGAV KDLSEMVSNC LAIFAGKVKD LSGVPVVNNR 240 KLLGTEETEE LPNWLKREDR ELLGTPTSAI QADITVSKDG SGTFKTIAEA IKKAPEHSSR 300 RFVIYVKAGR YEEENLKVGR KKTNLMFIGD GKGKTVITGG KSIADDLTTF HTATFAATGA 360 GFIVRDMTFE NYAGPAKHQA VALRVGGDHA VVYRCNIIGY QDALYVHSNR QFFRECEIYG 420 TVDFIFGNAA VILQSCNIYA RKPMAQQKIT ITAQNRKDPN QNTGISIHAC KLLATPDLEA 480 SKGSYPTYLG RPWKLYSRVV YMMSDMGDHI DPRGWLEWNG PFALDSLYYG EYMNKGLGSG 540 IGQRVKWPGY HVITSTVEAS KFTVAQFISG SSWLPSTGVS FFSGLSQ* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02506 | PLN02506 | 1.0e-161 | 72 | 586 | 521 | + putative pectinesterase/pectinesterase inhibitor | ||
PLN02201 | PLN02201 | 7.0e-163 | 136 | 585 | 457 | + probable pectinesterase/pectinesterase inhibitor | ||
PLN02301 | PLN02301 | 2.0e-174 | 66 | 585 | 524 | + pectinesterase/pectinesterase inhibitor | ||
PLN02484 | PLN02484 | 0 | 1 | 587 | 589 | + probable pectinesterase/pectinesterase inhibitor | ||
pfam01095 | Pectinesterase | 0 | 273 | 571 | 299 | + Pectinesterase. |
Gene Ontology | |
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GO Term | Description |
GO:0004857 | enzyme inhibitor activity |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
DDBJ | BAF42038.1 | 0 | 67 | 586 | 81 | 616 | pectin methylesterase 1 [Pyrus communis] |
RefSeq | NP_200149.1 | 0 | 1 | 587 | 1 | 587 | PMEPCRF (PECTIN METHYLESTERASE PCR FRAGMENT F); pectinesterase [Arabidopsis thaliana] |
RefSeq | XP_002278061.1 | 0 | 56 | 586 | 57 | 596 | PREDICTED: similar to pectin methylesterase 1 [Vitis vinifera] |
RefSeq | XP_002317777.1 | 0 | 54 | 585 | 14 | 550 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002321999.1 | 0 | 1 | 586 | 1 | 604 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 0 | 267 | 585 | 2 | 319 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 0 | 270 | 585 | 1 | 315 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 1qjv_B | 9e-21 | 277 | 543 | 12 | 315 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 1qjv_A | 9e-21 | 277 | 543 | 12 | 315 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 2ntq_B | 1e-20 | 277 | 543 | 12 | 315 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
homogalacturonan degradation | RXN-2102 | EC-3.1.1.11 | pectinesterase |