| Basic Information | |
|---|---|
| Species | Arabidopsis thaliana |
| Cazyme ID | AT5G53600.1 |
| Family | CBM43 |
| Protein Properties | Length: 112 Molecular Weight: 12290.1 Isoelectric Point: 7.7503 |
| Chromosome | Chromosome/Scaffold: 5 Start: 21777107 End: 21777442 |
| Description | X8 domain containing protein, expressed |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CBM43 | 29 | 109 | 3.9e-29 |
| WCTAMPTSTTEQLQSNINFACNHVDCAPIQPGGFCYYPNTLLDHAAFAMTRYYRSQGHTYAACSFGNTGYIISSDPSVGTC | |||
| Full Sequence |
|---|
| Protein Sequence Length: 112 Download |
| MSLKLLTFLF LLSAAVIYHI PVVTCRRTWC TAMPTSTTEQ LQSNINFACN HVDCAPIQPG 60 GFCYYPNTLL DHAAFAMTRY YRSQGHTYAA CSFGNTGYII SSDPSVGTCI F* 120 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam07983 | X8 | 5.0e-16 | 28 | 98 | 77 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
| smart00768 | X8 | 6.0e-33 | 28 | 111 | 85 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0003674 | molecular_function |
| GO:0008150 | biological_process |
| GO:0012505 | endomembrane system |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| DDBJ | BAB10565.1 | 1e-24 | 20 | 92 | 18 | 90 | unnamed protein product [Arabidopsis thaliana] |
| DDBJ | BAB10565.1 | 1e-30 | 25 | 111 | 89 | 176 | unnamed protein product [Arabidopsis thaliana] |
| RefSeq | NP_001078788.1 | 9e-33 | 20 | 111 | 17 | 108 | unknown protein [Arabidopsis thaliana] |
| RefSeq | NP_200172.1 | 0 | 1 | 111 | 1 | 111 | glycosyl hydrolase family protein 17 [Arabidopsis thaliana] |
| RefSeq | NP_200173.1 | 0 | 1 | 111 | 1 | 110 | glycosyl hydrolase family protein 17 [Arabidopsis thaliana] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2jon_A | 1e-20 | 21 | 111 | 5 | 96 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |
