y
Basic Information | |
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Species | Arabidopsis thaliana |
Cazyme ID | AT5G54690.1 |
Family | GT8 |
Protein Properties | Length: 536 Molecular Weight: 60880.4 Isoelectric Point: 9.4969 |
Chromosome | Chromosome/Scaffold: 5 Start: 22219224 End: 22221840 |
Description | glycosyl transferase 8 domain containing protein, putative, expressed |
View CDS |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT8 | 175 | 507 | 0 |
CLALKLANEHSINAAARLQLPEAELVPMLVDNNYFHFVLASDNILAASVVAKSLVQNALRPHKIVLHIITDRKTYFPMQAWFSLHPLSPAIIEVKALHHF DWLSKGKVPVLEAMEKDQRVRSQFRGGSSVIVANNKENPVVVAAKLQALSPKYNSLMNHIRIHLPELFPSLNKVVFLDDDIVIQTDLSPLWDIDMNGKVN GAVETCRGEDKFVMSKKFKSYLNFSNPTIAKNFNPEECAWAYGMNVFDLAAWRRTNISSTYYHWLDENLKSDLSLWQLGTLPPGLIAFHGHVQTIDPFWH MLGLGYQETTSYADAESAAVVHFNGRAKPWLDI |
Full Sequence |
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Protein Sequence Length: 536 Download |
MQLHISPSLR HVTVVTGKGL REFIKVKVGS RRFSYQMVFY SLLFFTFLLR FVFVLSTVDT 60 IDGDPSPCSS LACLGKRLKP KLLGRRVDSG NVPEAMYQVL EQPLSEQELK GRSDIPQTLQ 120 DFMSEVKRSK SDAREFAQKL KEMVTLMEQR TRTAKIQEYL YRHVASSSIP KQLHCLALKL 180 ANEHSINAAA RLQLPEAELV PMLVDNNYFH FVLASDNILA ASVVAKSLVQ NALRPHKIVL 240 HIITDRKTYF PMQAWFSLHP LSPAIIEVKA LHHFDWLSKG KVPVLEAMEK DQRVRSQFRG 300 GSSVIVANNK ENPVVVAAKL QALSPKYNSL MNHIRIHLPE LFPSLNKVVF LDDDIVIQTD 360 LSPLWDIDMN GKVNGAVETC RGEDKFVMSK KFKSYLNFSN PTIAKNFNPE ECAWAYGMNV 420 FDLAAWRRTN ISSTYYHWLD ENLKSDLSLW QLGTLPPGLI AFHGHVQTID PFWHMLGLGY 480 QETTSYADAE SAAVVHFNGR AKPWLDIAFP HLRPLWAKYL DSSDRFIKSC HIRAS* 540 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02523 | PLN02523 | 7.0e-128 | 88 | 530 | 443 | + galacturonosyltransferase | ||
PLN02742 | PLN02742 | 5.0e-131 | 139 | 533 | 395 | + Probable galacturonosyltransferase | ||
PLN02867 | PLN02867 | 1.0e-158 | 105 | 532 | 431 | + Probable galacturonosyltransferase | ||
PLN02659 | PLN02659 | 0 | 1 | 535 | 535 | + Probable galacturonosyltransferase | ||
PLN02870 | PLN02870 | 0 | 1 | 535 | 535 | + Probable galacturonosyltransferase |
Gene Ontology | |
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GO Term | Description |
GO:0005794 | Golgi apparatus |
GO:0007047 | : GO:0044234 |
GO:0010413 | glucuronoxylan metabolic process |
GO:0010417 | glucuronoxylan biosynthetic process |
GO:0016051 | carbohydrate biosynthetic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABP65660.1 | 0 | 1 | 535 | 1 | 533 | secondary wall-associated glycosyltransferase family 8D [Populus tremula x Populus alba] |
EMBL | CBI20502.1 | 0 | 1 | 535 | 1 | 533 | unnamed protein product [Vitis vinifera] |
RefSeq | NP_200280.1 | 0 | 1 | 535 | 1 | 535 | GAUT12 (GALACTURONOSYLTRANSFERASE 12); polygalacturonate 4-alpha-galacturonosyltransferase/ transferase, transferring glycosyl groups / transferase, transferring hexosyl groups [Arabidopsis thaliana] |
RefSeq | XP_002282637.1 | 0 | 1 | 535 | 1 | 534 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002319802.1 | 0 | 1 | 535 | 1 | 533 | glycosyltransferase, CAZy family GT8 [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1ss9_A | 0.000009 | 323 | 504 | 74 | 252 | A Chain A, Crystal Structural Analysis Of Active Site Mutant Q189e Of Lgtc |
PDB | 1ga8_A | 0.00002 | 323 | 504 | 74 | 252 | A Chain A, Crystal Structural Analysis Of Active Site Mutant Q189e Of Lgtc |
PDB | 1g9r_A | 0.00002 | 323 | 504 | 74 | 252 | A Chain A, Crystal Structure Of Galactosyltransferase Lgtc In Complex With Mn And Udp-2f-Galactose |