| Basic Information | |
|---|---|
| Species | Arabidopsis thaliana |
| Cazyme ID | AT5G55590.1 |
| Family | CE8 |
| Protein Properties | Length: 381 Molecular Weight: 42474.8 Isoelectric Point: 6.6549 |
| Chromosome | Chromosome/Scaffold: 5 Start: 22519911 End: 22521858 |
| Description | pectinesterase, putative, expressed |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CE8 | 82 | 373 | 0 |
| IVVDKNGGGDSVTVQGAVDMVPDSNSQRVKIFILPGIYREKVIVPKSKPYISFIGNESYAGDTVISWSDKASDLGCDGKELGTYRTASVSIESDFFCATA ITFENTVVAEAGEQGRQAVALRIIGDKAVFYRVRVLGSQDTLFDDNGSHYFYQCYIQGNVDFIFGNAKSLYQDCDIHSTAKRYGAIAAHHRDSETEDTGF SFVNCDISGTGQIYLGRAWGNYSRTVYSNCFIADIITPVGWSDWKHPERQRKVMFGEYNCRGRGAERGGRVPWSKTLTRDEVKPFLGREFIY | |||
| Full Sequence |
|---|
| Protein Sequence Length: 381 Download |
| MKVEAFIPAV LLLCFGVMLC LKSSCALQIG NNNELKNYIS WEDLRVVEDG RIERSFSIKE 60 NSNWVTTNAN ANANATNVRR VIVVDKNGGG DSVTVQGAVD MVPDSNSQRV KIFILPGIYR 120 EKVIVPKSKP YISFIGNESY AGDTVISWSD KASDLGCDGK ELGTYRTASV SIESDFFCAT 180 AITFENTVVA EAGEQGRQAV ALRIIGDKAV FYRVRVLGSQ DTLFDDNGSH YFYQCYIQGN 240 VDFIFGNAKS LYQDCDIHST AKRYGAIAAH HRDSETEDTG FSFVNCDISG TGQIYLGRAW 300 GNYSRTVYSN CFIADIITPV GWSDWKHPER QRKVMFGEYN CRGRGAERGG RVPWSKTLTR 360 DEVKPFLGRE FIYGDQWLRL * 420 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02432 | PLN02432 | 5.0e-104 | 81 | 379 | 299 | + putative pectinesterase | ||
| PLN02665 | PLN02665 | 2.0e-105 | 79 | 378 | 303 | + pectinesterase family protein | ||
| PLN02634 | PLN02634 | 5.0e-114 | 80 | 378 | 303 | + probable pectinesterase | ||
| PLN02682 | PLN02682 | 6.0e-126 | 80 | 380 | 303 | + pectinesterase family protein | ||
| PLN02671 | PLN02671 | 0 | 1 | 380 | 380 | + pectinesterase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005618 | cell wall |
| GO:0009505 | plant-type cell wall |
| GO:0012505 | endomembrane system |
| GO:0030599 | pectinesterase activity |
| GO:0042545 | cell wall modification |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | EEE67559.1 | 0 | 38 | 380 | 33 | 398 | hypothetical protein OsJ_25062 [Oryza sativa Japonica Group] |
| RefSeq | NP_200370.1 | 0 | 1 | 380 | 1 | 380 | QRT1 (QUARTET 1); pectinesterase [Arabidopsis thaliana] |
| RefSeq | XP_002264297.1 | 0 | 77 | 380 | 56 | 359 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002298857.1 | 0 | 77 | 380 | 15 | 318 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002522727.1 | 0 | 9 | 380 | 27 | 383 | Pectinesterase U1 precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1gq8_A | 0 | 82 | 379 | 9 | 309 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 1xg2_A | 5e-39 | 83 | 379 | 6 | 305 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 3uw0_A | 0.000000000000001 | 83 | 366 | 34 | 352 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
| PDB | 1qjv_B | 0.00000000000009 | 75 | 346 | 1 | 311 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
| PDB | 1qjv_A | 0.00000000000009 | 75 | 346 | 1 | 311 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| homogalacturonan degradation | RXN-2102 | EC-3.1.1.11 | pectinesterase |
