| Basic Information | |
|---|---|
| Species | Arabidopsis thaliana |
| Cazyme ID | AT5G55700.1 |
| Family | GH14 |
| Protein Properties | Length: 532 Molecular Weight: 60116.9 Isoelectric Point: 8.5642 |
| Chromosome | Chromosome/Scaffold: 5 Start: 22551749 End: 22554964 |
| Description | beta-amylase, putative, expressed |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH14 | 95 | 520 | 0 |
| FVMMPIDTFGIDASGCPKIKRLKALTVSLKALKLAGVHGIAVEVWWGIVERFSPLEFKWSLYEELFRLISEAGLKLHVALCFHSNMHLFGGKGGISLPLW IREIGDVNKDIYYRDKSGFSNNDYLTLGVDQLPLFGGRTAVQCYEDFMLSFSTKFEPYLGNVIEEISIGLGPSGELRYPAHPSGDGRWKFPGIGEFQCHD KYMMEDLMAVASQEGKPQWGSRDPPNTGCYNSFPSGVPFFEEGNDSFLSDYGRFFLEWYSGKLICHADAILAKAADVLRRRQEEEKSSVMLVAKIGGIYW WYKTSSHPAELTAGYYNTSLRDGYDPVASVLSRHGAALNIPCLDMADSEIPEKYLCSPEGLRRQIHDVSKKWTIHVTGRNTSERFDEMGLRQIRENCVQP NGDTLRSFTFCRMNEKIFRVENWNNF | |||
| Full Sequence |
|---|
| Protein Sequence Length: 532 Download |
| MTETGVIGCG CRGVTGGNFF HPGGFSLKSC FLEQSTKRNR NFFRSVSMIP PFKRGRFITK 60 LRSVAGNSRI FSMDAREKSR SFVLVSSRHK RVPVFVMMPI DTFGIDASGC PKIKRLKALT 120 VSLKALKLAG VHGIAVEVWW GIVERFSPLE FKWSLYEELF RLISEAGLKL HVALCFHSNM 180 HLFGGKGGIS LPLWIREIGD VNKDIYYRDK SGFSNNDYLT LGVDQLPLFG GRTAVQCYED 240 FMLSFSTKFE PYLGNVIEEI SIGLGPSGEL RYPAHPSGDG RWKFPGIGEF QCHDKYMMED 300 LMAVASQEGK PQWGSRDPPN TGCYNSFPSG VPFFEEGNDS FLSDYGRFFL EWYSGKLICH 360 ADAILAKAAD VLRRRQEEEK SSVMLVAKIG GIYWWYKTSS HPAELTAGYY NTSLRDGYDP 420 VASVLSRHGA ALNIPCLDMA DSEIPEKYLC SPEGLRRQIH DVSKKWTIHV TGRNTSERFD 480 EMGLRQIREN CVQPNGDTLR SFTFCRMNEK IFRVENWNNF VPFIRQMSAD M* 540 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02905 | PLN02905 | 5.0e-105 | 92 | 530 | 446 | + beta-amylase | ||
| PLN00197 | PLN00197 | 6.0e-139 | 90 | 527 | 443 | + beta-amylase; Provisional | ||
| PLN02801 | PLN02801 | 4.0e-139 | 92 | 530 | 453 | + beta-amylase | ||
| PLN02803 | PLN02803 | 6.0e-155 | 34 | 528 | 505 | + beta-amylase | ||
| PLN02161 | PLN02161 | 0 | 1 | 531 | 531 | + beta-amylase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0000272 | polysaccharide catabolic process |
| GO:0005983 | starch catabolic process |
| GO:0009507 | chloroplast |
| GO:0016161 | beta-amylase activity |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAK76508.1 | 0 | 48 | 531 | 1 | 484 | putative beta-amylase [Arabidopsis thaliana] |
| GenBank | AAK84008.1 | 0 | 86 | 528 | 77 | 508 | AF393847_1 beta-amylase PCT-BMYI [Solanum tuberosum] |
| DDBJ | BAH20280.1 | 0 | 34 | 531 | 1 | 498 | AT5G55700 [Arabidopsis thaliana] |
| RefSeq | NP_568829.2 | 0 | 1 | 531 | 1 | 531 | BAM4 (BETA-AMYLASE 4); beta-amylase/ catalytic/ cation binding [Arabidopsis thaliana] |
| RefSeq | XP_002265698.1 | 0 | 1 | 531 | 1 | 522 | PREDICTED: hypothetical protein [Vitis vinifera] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1v3i_A | 0 | 92 | 530 | 12 | 444 | A Chain A, The Roles Of Glu186 And Glu380 In The Catalytic Reaction Of Soybean Beta-Amylase |
| PDB | 1q6d_A | 0 | 92 | 530 | 12 | 444 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant (M51t) With Increased Ph Optimum |
| PDB | 1uko_D | 0 | 92 | 530 | 12 | 444 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant Substituted At Surface Region |
| PDB | 1uko_C | 0 | 92 | 530 | 12 | 444 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant Substituted At Surface Region |
| PDB | 1uko_B | 0 | 92 | 530 | 12 | 444 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant Substituted At Surface Region |
| Hydropathy |
|---|
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| EE465458 | 241 | 244 | 484 | 0 |
| DR365735 | 223 | 87 | 309 | 0 |
| EV096717 | 235 | 115 | 349 | 0 |
| ES906343 | 258 | 1 | 257 | 0 |
| FY454531 | 268 | 14 | 276 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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