| Basic Information | |
|---|---|
| Species | Arabidopsis thaliana |
| Cazyme ID | AT5G56870.1 |
| Family | GH35 |
| Protein Properties | Length: 725 Molecular Weight: 80591.2 Isoelectric Point: 8.8821 |
| Chromosome | Chromosome/Scaffold: 5 Start: 23004196 End: 23008649 |
| Description | beta-galactosidase precursor, putative, expressed |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH35 | 37 | 338 | 0 |
| IINGQRRILLSGSIHYPRSTPEMWPGLIQKAKEGGLDVIETYVFWNGHEPSPGQYYFGDRYDLVKFIKLVHQAGLYVNLRIGPYVCAEWNFGGFPVWLKF VPGMAFRTDNEPFKAAMKKFTEKIVWMMKAEKLFQTQGGPIILAQIENEYGPVEWEIGAPGKAYTKWVAQMALGLSTGVPWIMCKQEDAPGPIIDTCNGY YCEDFKPNSINKPKMWTENWTGWYTDFGGAVPYRPVEDIAYSVARFIQKGGSLVNYYMYHGGTNFDRTAGEFMASSYDYDAPLDEYGLPREPKYSHLKAL HK | |||
| Full Sequence |
|---|
| Protein Sequence Length: 725 Download |
| MVLNFRDKSC IFLAILCCLS LSCIVKASVS YDRKAVIING QRRILLSGSI HYPRSTPEMW 60 PGLIQKAKEG GLDVIETYVF WNGHEPSPGQ YYFGDRYDLV KFIKLVHQAG LYVNLRIGPY 120 VCAEWNFGGF PVWLKFVPGM AFRTDNEPFK AAMKKFTEKI VWMMKAEKLF QTQGGPIILA 180 QIENEYGPVE WEIGAPGKAY TKWVAQMALG LSTGVPWIMC KQEDAPGPII DTCNGYYCED 240 FKPNSINKPK MWTENWTGWY TDFGGAVPYR PVEDIAYSVA RFIQKGGSLV NYYMYHGGTN 300 FDRTAGEFMA SSYDYDAPLD EYGLPREPKY SHLKALHKAI KLSEPALLSA DATVTSLGAK 360 QEAYVFWSKS SCAAFLSNKD ENSAARVLFR GFPYDLPPWS VSILPDCKTE VYNTAKVNAP 420 SVHRNMVPTG TKFSWGSFNE ATPTANEAGT FARNGLVEQI SMTWDKSDYF WYITDITIGS 480 GETFLKTGDS PLLTVMSAGH ALHVFVNGQL SGTAYGGLDH PKLTFSQKIK LHAGVNKIAL 540 LSVAVGLPNV GTHFEQWNKG VLGPVTLKGV NSGTWDMSKW KWSYKIGVKG EALSLHTNTE 600 SSGVRWTQGS FVAKKQPLTW YKSTFATPAG NEPLALDMNT MGKGQVWING RNIGRHWPAY 660 KAQGSCGRCN YAGTFDAKKC LSNCGEASQR WYHVPRSWLK SQNLIVVFEE LGGDPNGISL 720 VKRT* 780 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam02449 | Glyco_hydro_42 | 0.0002 | 51 | 187 | 151 | + Beta-galactosidase. This group of beta-galactosidase enzymes belong to the glycosyl hydrolase 42 family. The enzyme catalyzes the hydrolysis of terminal, non-reducing terminal beta-D-galactosidase residues. | ||
| COG1874 | LacA | 3.0e-21 | 29 | 331 | 352 | + Beta-galactosidase [Carbohydrate transport and metabolism] | ||
| pfam01301 | Glyco_hydro_35 | 1.0e-155 | 37 | 340 | 320 | + Glycosyl hydrolases family 35. | ||
| PLN03059 | PLN03059 | 0 | 25 | 724 | 702 | + beta-galactosidase; Provisional | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0004565 | beta-galactosidase activity |
| GO:0005975 | carbohydrate metabolic process |
| GO:0005990 | lactose catabolic process |
| GO:0012505 | endomembrane system |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAK96780.1 | 0 | 1 | 724 | 1 | 724 | beta-galactosidase [Arabidopsis thaliana] |
| DDBJ | BAH20357.1 | 0 | 105 | 724 | 1 | 620 | AT5G56870 [Arabidopsis thaliana] |
| EMBL | CAB39679.1 | 0 | 1 | 724 | 1 | 727 | putative beta-galactosidase [Arabidopsis thaliana] |
| RefSeq | NP_200498.1 | 0 | 1 | 724 | 1 | 724 | BGAL4 (beta-galactosidase 4); beta-galactosidase [Arabidopsis thaliana] |
| RefSeq | NP_849553.1 | 0 | 1 | 724 | 1 | 726 | BGAL12 (beta-galactosidase 12); beta-galactosidase/ catalytic/ cation binding [Arabidopsis thaliana] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3thd_D | 6e-40 | 29 | 344 | 11 | 339 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
| PDB | 3thd_C | 6e-40 | 29 | 344 | 11 | 339 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
| PDB | 3thd_B | 6e-40 | 29 | 344 | 11 | 339 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| lactose degradation III | BETAGALACTOSID-RXN | EC-3.2.1.23 | β-galactosidase |
