| Basic Information | |
|---|---|
| Species | Arabidopsis thaliana |
| Cazyme ID | AT5G57700.1 |
| Family | GH33 |
| Protein Properties | Length: 353 Molecular Weight: 39040.3 Isoelectric Point: 5.4201 |
| Chromosome | Chromosome/Scaffold: 5 Start: 23374874 End: 23377142 |
| Description | BNR/Asp-box repeat family protein, putative, expressed |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH33 | 15 | 315 | 1.2e-32 |
| LETFTFPADSAPFKSCHASTIVEVVKDHFLAAYFGGTREGAPDVKIWLQHFKDGQWDSPVIVDEEPGVPMYNPVLFKLPSHELLLFYKIGQEVQKWSGCM KRSYDKGITWTEREQLPPGILGPIKNKPILLEDGTLLCGSSVESWNSWGAWMEVTSDAGRTWRKKGPIYIQGKSLSVIQPVPYQTAAGNLRILLRSFTGI DRICISESLDGGENWSFAVPTVLPNPNSGIDGVKLKDGRLVLAYNTDSRGVLKLGVSLDDGDSWTDILTLEESPGMEYSYPAVIQAGDGNVHVTYTYNRT Q | |||
| Full Sequence |
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| Protein Sequence Length: 353 Download |
| MKSSQMSETE FKVLLETFTF PADSAPFKSC HASTIVEVVK DHFLAAYFGG TREGAPDVKI 60 WLQHFKDGQW DSPVIVDEEP GVPMYNPVLF KLPSHELLLF YKIGQEVQKW SGCMKRSYDK 120 GITWTEREQL PPGILGPIKN KPILLEDGTL LCGSSVESWN SWGAWMEVTS DAGRTWRKKG 180 PIYIQGKSLS VIQPVPYQTA AGNLRILLRS FTGIDRICIS ESLDGGENWS FAVPTVLPNP 240 NSGIDGVKLK DGRLVLAYNT DSRGVLKLGV SLDDGDSWTD ILTLEESPGM EYSYPAVIQA 300 GDGNVHVTYT YNRTQIKHVV LKTATDIDSK PYRHGEAGGG HVNLDLYEPN IN* 360 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| cd00260 | Sialidase | 0.0003 | 114 | 326 | 246 | + Sialidases or neuraminidases function to bind and hydrolyze terminal sialic acid residues from various glycoconjugates as well as playing roles in pathogenesis, bacterial nutrition and cellular interactions. They have a six-bladed, beta-propeller fold with the non-viral sialidases containing 2-5 Asp-box motifs (most commonly Ser/Thr-X-Asp-[X]-Gly-X-Thr- Trp/Phe). This CD includes eubacterial, eukaryotic, and viral sialidases. | ||
| cd00260 | Sialidase | 1.0e-5 | 110 | 293 | 208 | + Sialidases or neuraminidases function to bind and hydrolyze terminal sialic acid residues from various glycoconjugates as well as playing roles in pathogenesis, bacterial nutrition and cellular interactions. They have a six-bladed, beta-propeller fold with the non-viral sialidases containing 2-5 Asp-box motifs (most commonly Ser/Thr-X-Asp-[X]-Gly-X-Thr- Trp/Phe). This CD includes eubacterial, eukaryotic, and viral sialidases. | ||
| COG4692 | COG4692 | 3.0e-30 | 26 | 324 | 351 | + Predicted neuraminidase (sialidase) [Carbohydrate transport and metabolism] | ||
| pfam13088 | BNR_2 | 6.0e-101 | 41 | 307 | 282 | + BNR repeat-like domain. This family of proteins contains BNR-like repeats suggesting these proteins may act as sialidases. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005575 | cellular_component |
| GO:0008150 | biological_process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAM61202.1 | 0 | 6 | 352 | 1 | 347 | unknown [Arabidopsis thaliana] |
| RefSeq | NP_001078763.1 | 0 | 1 | 352 | 7 | 358 | BNR/Asp-box repeat family protein [Arabidopsis thaliana] |
| RefSeq | NP_001154784.1 | 0 | 6 | 352 | 2 | 348 | BNR/Asp-box repeat family protein [Arabidopsis thaliana] |
| RefSeq | NP_568864.2 | 0 | 6 | 352 | 1 | 347 | BNR/Asp-box repeat family protein [Arabidopsis thaliana] |
| RefSeq | NP_851204.1 | 0 | 1 | 352 | 1 | 352 | BNR/Asp-box repeat family protein [Arabidopsis thaliana] |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| ES962106 | 261 | 35 | 295 | 0 |
| DK493056 | 244 | 6 | 249 | 0 |
| EV057257 | 241 | 1 | 241 | 0 |
| CA781390 | 222 | 1 | 222 | 0 |
| EL689016 | 287 | 22 | 308 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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