| Basic Information | |
|---|---|
| Species | Arabidopsis thaliana |
| Cazyme ID | AT5G57700.3 |
| Family | GH33 |
| Protein Properties | Length: 359 Molecular Weight: 39713.2 Isoelectric Point: 5.4199 |
| Chromosome | Chromosome/Scaffold: 5 Start: 23375242 End: 23377142 |
| Description | BNR/Asp-box repeat family protein, putative, expressed |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GH33 | 21 | 321 | 1.3e-32 |
| LETFTFPADSAPFKSCHASTIVEVVKDHFLAAYFGGTREGAPDVKIWLQHFKDGQWDSPVIVDEEPGVPMYNPVLFKLPSHELLLFYKIGQEVQKWSGCM KRSYDKGITWTEREQLPPGILGPIKNKPILLEDGTLLCGSSVESWNSWGAWMEVTSDAGRTWRKKGPIYIQGKSLSVIQPVPYQTAAGNLRILLRSFTGI DRICISESLDGGENWSFAVPTVLPNPNSGIDGVKLKDGRLVLAYNTDSRGVLKLGVSLDDGDSWTDILTLEESPGMEYSYPAVIQAGDGNVHVTYTYNRT Q | |||
| Full Sequence |
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| Protein Sequence Length: 359 Download |
| MLICLVMKSS QMSETEFKVL LETFTFPADS APFKSCHAST IVEVVKDHFL AAYFGGTREG 60 APDVKIWLQH FKDGQWDSPV IVDEEPGVPM YNPVLFKLPS HELLLFYKIG QEVQKWSGCM 120 KRSYDKGITW TEREQLPPGI LGPIKNKPIL LEDGTLLCGS SVESWNSWGA WMEVTSDAGR 180 TWRKKGPIYI QGKSLSVIQP VPYQTAAGNL RILLRSFTGI DRICISESLD GGENWSFAVP 240 TVLPNPNSGI DGVKLKDGRL VLAYNTDSRG VLKLGVSLDD GDSWTDILTL EESPGMEYSY 300 PAVIQAGDGN VHVTYTYNRT QIKHVVLKTA TDIDSKPYRH GEAGGGHVNL DLYEPNIN* 360 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| cd00260 | Sialidase | 0.0003 | 120 | 332 | 246 | + Sialidases or neuraminidases function to bind and hydrolyze terminal sialic acid residues from various glycoconjugates as well as playing roles in pathogenesis, bacterial nutrition and cellular interactions. They have a six-bladed, beta-propeller fold with the non-viral sialidases containing 2-5 Asp-box motifs (most commonly Ser/Thr-X-Asp-[X]-Gly-X-Thr- Trp/Phe). This CD includes eubacterial, eukaryotic, and viral sialidases. | ||
| cd00260 | Sialidase | 1.0e-5 | 116 | 299 | 208 | + Sialidases or neuraminidases function to bind and hydrolyze terminal sialic acid residues from various glycoconjugates as well as playing roles in pathogenesis, bacterial nutrition and cellular interactions. They have a six-bladed, beta-propeller fold with the non-viral sialidases containing 2-5 Asp-box motifs (most commonly Ser/Thr-X-Asp-[X]-Gly-X-Thr- Trp/Phe). This CD includes eubacterial, eukaryotic, and viral sialidases. | ||
| COG4692 | COG4692 | 2.0e-30 | 32 | 330 | 351 | + Predicted neuraminidase (sialidase) [Carbohydrate transport and metabolism] | ||
| pfam13088 | BNR_2 | 3.0e-101 | 47 | 313 | 282 | + BNR repeat-like domain. This family of proteins contains BNR-like repeats suggesting these proteins may act as sialidases. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005575 | cellular_component |
| GO:0008150 | biological_process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| DDBJ | BAB09588.1 | 0 | 7 | 358 | 1 | 371 | unnamed protein product [Arabidopsis thaliana] |
| RefSeq | NP_001078763.1 | 0 | 1 | 358 | 1 | 358 | BNR/Asp-box repeat family protein [Arabidopsis thaliana] |
| RefSeq | NP_001154784.1 | 0 | 12 | 358 | 2 | 348 | BNR/Asp-box repeat family protein [Arabidopsis thaliana] |
| RefSeq | NP_568864.2 | 0 | 12 | 358 | 1 | 347 | BNR/Asp-box repeat family protein [Arabidopsis thaliana] |
| RefSeq | NP_851204.1 | 0 | 7 | 358 | 1 | 352 | BNR/Asp-box repeat family protein [Arabidopsis thaliana] |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
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| Hit | Length | Start | End | EValue |
| ES962106 | 261 | 41 | 301 | 0 |
| DK493056 | 244 | 12 | 255 | 0 |
| EV057257 | 241 | 7 | 247 | 0 |
| CA781390 | 222 | 7 | 228 | 0 |
| EL689016 | 287 | 28 | 314 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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