| Basic Information | |
|---|---|
| Species | Arabidopsis thaliana |
| Cazyme ID | AT5G57700.4 |
| Family | GH33 |
| Protein Properties | Length: 349 Molecular Weight: 38609.8 Isoelectric Point: 5.2372 |
| Chromosome | Chromosome/Scaffold: 5 Start: 23375170 End: 23377142 |
| Description | BNR/Asp-box repeat family protein, putative, expressed |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH33 | 11 | 311 | 1.2e-32 |
| LETFTFPADSAPFKSCHASTIVEVVKDHFLAAYFGGTREGAPDVKIWLQHFKDGQWDSPVIVDEEPGVPMYNPVLFKLPSHELLLFYKIGQEVQKWSGCM KRSYDKGITWTEREQLPPGILGPIKNKPILLEDGTLLCGSSVESWNSWGAWMEVTSDAGRTWRKKGPIYIQGKSLSVIQPVPYQTAAGNLRILLRSFTGI DRICISESLDGGENWSFAVPTVLPNPNSGIDGVKLKDGRLVLAYNTDSRGVLKLGVSLDDGDSWTDILTLEESPGMEYSYPAVIQAGDGNVHVTYTYNRT Q | |||
| Full Sequence |
|---|
| Protein Sequence Length: 349 Download |
| MMSETEFKVL LETFTFPADS APFKSCHAST IVEVVKDHFL AAYFGGTREG APDVKIWLQH 60 FKDGQWDSPV IVDEEPGVPM YNPVLFKLPS HELLLFYKIG QEVQKWSGCM KRSYDKGITW 120 TEREQLPPGI LGPIKNKPIL LEDGTLLCGS SVESWNSWGA WMEVTSDAGR TWRKKGPIYI 180 QGKSLSVIQP VPYQTAAGNL RILLRSFTGI DRICISESLD GGENWSFAVP TVLPNPNSGI 240 DGVKLKDGRL VLAYNTDSRG VLKLGVSLDD GDSWTDILTL EESPGMEYSY PAVIQAGDGN 300 VHVTYTYNRT QIKHVVLKTA TDIDSKPYRH GEAGGGHVNL DLYEPNIN* 360 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| cd00260 | Sialidase | 0.0003 | 110 | 322 | 246 | + Sialidases or neuraminidases function to bind and hydrolyze terminal sialic acid residues from various glycoconjugates as well as playing roles in pathogenesis, bacterial nutrition and cellular interactions. They have a six-bladed, beta-propeller fold with the non-viral sialidases containing 2-5 Asp-box motifs (most commonly Ser/Thr-X-Asp-[X]-Gly-X-Thr- Trp/Phe). This CD includes eubacterial, eukaryotic, and viral sialidases. | ||
| cd00260 | Sialidase | 1.0e-5 | 106 | 289 | 208 | + Sialidases or neuraminidases function to bind and hydrolyze terminal sialic acid residues from various glycoconjugates as well as playing roles in pathogenesis, bacterial nutrition and cellular interactions. They have a six-bladed, beta-propeller fold with the non-viral sialidases containing 2-5 Asp-box motifs (most commonly Ser/Thr-X-Asp-[X]-Gly-X-Thr- Trp/Phe). This CD includes eubacterial, eukaryotic, and viral sialidases. | ||
| COG4692 | COG4692 | 3.0e-30 | 22 | 320 | 351 | + Predicted neuraminidase (sialidase) [Carbohydrate transport and metabolism] | ||
| pfam13088 | BNR_2 | 7.0e-101 | 37 | 303 | 282 | + BNR repeat-like domain. This family of proteins contains BNR-like repeats suggesting these proteins may act as sialidases. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005575 | cellular_component |
| GO:0008150 | biological_process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAM61202.1 | 0 | 2 | 348 | 1 | 347 | unknown [Arabidopsis thaliana] |
| RefSeq | NP_001078763.1 | 0 | 2 | 348 | 12 | 358 | BNR/Asp-box repeat family protein [Arabidopsis thaliana] |
| RefSeq | NP_001154784.1 | 0 | 1 | 348 | 1 | 348 | BNR/Asp-box repeat family protein [Arabidopsis thaliana] |
| RefSeq | NP_568864.2 | 0 | 2 | 348 | 1 | 347 | BNR/Asp-box repeat family protein [Arabidopsis thaliana] |
| RefSeq | NP_851204.1 | 0 | 2 | 348 | 6 | 352 | BNR/Asp-box repeat family protein [Arabidopsis thaliana] |
| Hydropathy |
|---|
 |
| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| ES962106 | 261 | 31 | 291 | 0 |
| DK493056 | 244 | 2 | 245 | 0 |
| EV057257 | 236 | 2 | 237 | 0 |
| CA781390 | 217 | 2 | 218 | 0 |
| EL689016 | 287 | 18 | 304 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
|---|
 |
| Phylogeny |
|---|
 |