| Basic Information | |
|---|---|
| Species | Arabidopsis thaliana |
| Cazyme ID | AT5G58090.1 |
| Family | CBM43 |
| Protein Properties | Length: 478 Molecular Weight: 52211.4 Isoelectric Point: 5.6932 |
| Chromosome | Chromosome/Scaffold: 5 Start: 23505366 End: 23507288 |
| Description | glucan endo-1,3-beta-glucosidase precursor, putative, expressed |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CBM43 | 362 | 443 | 6.4e-24 |
| WCVMKPNVRLDDPQVAPAVSYACSLGDCTSLGVGTSCANLDGKQNISYAFNSYYQIQDQLDTACKFPNISEVTKTDPSTGTC | |||
| GH17 | 22 | 340 | 0 |
| IGANWGTQASHPLPPDIVVRMLRENGIQKVKLFDAEYDTLRALGKSGIEVMVGIPNEMLATLASSLKAAEKWVAKNVSTHISTDNVNIRYVAVGNEPFLS TYNGSYLSTTFPALRNIQIAIIKAGLQNQVKVTCPLNADVYDSSTTFPSGGDFRANIRDLMITIVKFLSENGGPFTVNIYPYISLYTNPDFPVDYAFFDG NAQPLNDGGTFYYNMFDANYDTLVHALEKNGFGNMPIIIGEIGWPTDGDSNANLDYAKKFNQGFMAHISGGKGTPRRPGPIDAYLFSLIDEDAKSVQPGY FERHWGIFTFDGLPKYALN | |||
| Full Sequence |
|---|
| Protein Sequence Length: 478 Download |
| MGWGSVLLLL AVALLCQRAS SIGANWGTQA SHPLPPDIVV RMLRENGIQK VKLFDAEYDT 60 LRALGKSGIE VMVGIPNEML ATLASSLKAA EKWVAKNVST HISTDNVNIR YVAVGNEPFL 120 STYNGSYLST TFPALRNIQI AIIKAGLQNQ VKVTCPLNAD VYDSSTTFPS GGDFRANIRD 180 LMITIVKFLS ENGGPFTVNI YPYISLYTNP DFPVDYAFFD GNAQPLNDGG TFYYNMFDAN 240 YDTLVHALEK NGFGNMPIII GEIGWPTDGD SNANLDYAKK FNQGFMAHIS GGKGTPRRPG 300 PIDAYLFSLI DEDAKSVQPG YFERHWGIFT FDGLPKYALN LGTTNTGALI QAKGVRYLER 360 KWCVMKPNVR LDDPQVAPAV SYACSLGDCT SLGVGTSCAN LDGKQNISYA FNSYYQIQDQ 420 LDTACKFPNI SEVTKTDPST GTCRFPIMIE PYYGGAAREH GFFFPLLMVA AIAVSIF* 480 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG5309 | COG5309 | 1.0e-6 | 202 | 332 | 134 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
| pfam07983 | X8 | 1.0e-14 | 361 | 427 | 74 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
| smart00768 | X8 | 2.0e-28 | 361 | 445 | 87 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
| pfam00332 | Glyco_hydro_17 | 3.0e-78 | 22 | 340 | 321 | + Glycosyl hydrolases family 17. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0003824 | catalytic activity |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005886 | plasma membrane |
| GO:0005975 | carbohydrate metabolic process |
| GO:0031225 | anchored to membrane |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAL24251.1 | 0 | 1 | 477 | 1 | 477 | AT5g58090/k21l19_70 [Arabidopsis thaliana] |
| RefSeq | NP_200617.2 | 0 | 1 | 477 | 1 | 477 | glycosyl hydrolase family 17 protein [Arabidopsis thaliana] |
| RefSeq | XP_002309034.1 | 0 | 19 | 461 | 1 | 444 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002331390.1 | 0 | 9 | 458 | 1 | 451 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002530371.1 | 0 | 20 | 477 | 21 | 478 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3f55_D | 0 | 22 | 341 | 2 | 315 | A Chain A, Crystal Structure Of Arabidopsis Thaliana Chalcone Isomerase At3g55120 (Atchi) |
| PDB | 3f55_C | 0 | 22 | 341 | 2 | 315 | A Chain A, Crystal Structure Of Arabidopsis Thaliana Chalcone Isomerase At3g55120 (Atchi) |
| PDB | 3f55_B | 0 | 22 | 341 | 2 | 315 | A Chain A, Crystal Structure Of Arabidopsis Thaliana Chalcone Isomerase At3g55120 (Atchi) |
| PDB | 3f55_A | 0 | 22 | 341 | 2 | 315 | A Chain A, Crystal Structure Of Arabidopsis Thaliana Chalcone Isomerase At3g55120 (Atchi) |
| PDB | 3em5_D | 0 | 22 | 341 | 2 | 315 | A Chain A, Crystal Structure Of A Native Endo Beta-1,3-Glucanase (Hev B 2), A Major Allergen From Hevea Brasiliensis |
