| Basic Information | |
|---|---|
| Species | Arabidopsis thaliana |
| Cazyme ID | AT5G59070.1 |
| Family | GT4 |
| Protein Properties | Length: 506 Molecular Weight: 56685.8 Isoelectric Point: 9.0784 |
| Chromosome | Chromosome/Scaffold: 5 Start: 23845198 End: 23847393 |
| Description | glycosyl transferase, group 1 domain containing protein, expressed |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT4 | 314 | 462 | 5.9e-21 |
| KKSPLVLGIAGRLVRDKGHPLMFSALKRVFEENKEARENVVVLVAGDGPWGNRYKDLGSTNVIVLGPLDQEKLAGFYNAIDVFVNPTLRAQGLDHTLLEA MVSGKPVLATRLASITGSVVVGPHLGYTFSPNVESLTEAILRVVSDGTE | |||
| Full Sequence |
|---|
| Protein Sequence Length: 506 Download |
| MARENPLMSF SFSFRYLCHF ALLLSLLSFV SFLFRHNTSL CSCLYDHNTY VNTFDHQQNN 60 ETIDLLRFSS AWNHLTFPSK PKKTLKIAVV VKKWPRKSQA GGLERHALTL HLALANRGHE 120 LHVFTAASPS FPEYQLKNLM FHLSEPTAAG YLDQASVSQQ LQTQNASGRP FDVIHTESVG 180 LLHTRAKNLR NVVASWHGIA YETFHSDIIQ ELLRQADIAA ATAAGTEEEQ PPPSSPALTE 240 RAKRVVEEVK FFQRYAHHVA TSDHCGDVLK RIYMIPEERV HIILNGVDEN VFKPDVSKRE 300 SFREKFGVRS GKNKKSPLVL GIAGRLVRDK GHPLMFSALK RVFEENKEAR ENVVVLVAGD 360 GPWGNRYKDL GSTNVIVLGP LDQEKLAGFY NAIDVFVNPT LRAQGLDHTL LEAMVSGKPV 420 LATRLASITG SVVVGPHLGY TFSPNVESLT EAILRVVSDG TEELQRKGKE ARERSLRLFT 480 ATKMADSYER FFLCISDQRF CTLQA* 540 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG0438 | RfaG | 2.0e-29 | 86 | 492 | 417 | + Glycosyltransferase [Cell envelope biogenesis, outer membrane] | ||
| cd03795 | GT1_like_4 | 7.0e-31 | 101 | 485 | 406 | + This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP-linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in bacteria and eukaryotes. | ||
| cd03807 | GT1_WbnK_like | 9.0e-34 | 250 | 492 | 250 | + This family is most closely related to the GT1 family of glycosyltransferases. WbnK in Shigella dysenteriae has been shown to be involved in the type 7 O-antigen biosynthesis. | ||
| cd03798 | GT1_wlbH_like | 1.0e-40 | 101 | 492 | 414 | + This family is most closely related to the GT1 family of glycosyltransferases. wlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS. | ||
| cd03801 | GT1_YqgM_like | 2.0e-57 | 86 | 492 | 420 | + This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in certain bacteria and archaea. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0009058 | biosynthetic process |
| GO:0012505 | endomembrane system |
| GO:0016757 | transferase activity, transferring glycosyl groups |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| DDBJ | BAB10782.1 | 0 | 1 | 505 | 1 | 521 | glycosyl transferase-like [Arabidopsis thaliana] |
| EMBL | CBI16041.1 | 0 | 12 | 504 | 131 | 606 | unnamed protein product [Vitis vinifera] |
| RefSeq | NP_200715.2 | 0 | 1 | 505 | 1 | 505 | glycosyl transferase family 1 protein [Arabidopsis thaliana] |
| RefSeq | XP_002280256.1 | 0 | 1 | 504 | 1 | 484 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002313414.1 | 0 | 71 | 497 | 1 | 411 | predicted protein [Populus trichocarpa] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3c4v_B | 0.00003 | 95 | 435 | 16 | 347 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
| PDB | 3c4v_A | 0.00003 | 95 | 435 | 16 | 347 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
| PDB | 3c4q_B | 0.00003 | 95 | 435 | 16 | 347 | A Chain A, Structure Of The Retaining Glycosyltransferase Msha : The First Step In Mycothiol Biosynthesis. Organism : Corynebacterium Glutamicum- Complex With Udp |
| PDB | 3c4q_A | 0.00003 | 95 | 435 | 16 | 347 | A Chain A, Structure Of The Retaining Glycosyltransferase Msha : The First Step In Mycothiol Biosynthesis. Organism : Corynebacterium Glutamicum- Complex With Udp |
| PDB | 3okp_A | 0.00004 | 285 | 459 | 170 | 344 | A Chain A, Structure Of The Retaining Glycosyltransferase Msha : The First Step In Mycothiol Biosynthesis. Organism : Corynebacterium Glutamicum- Complex With Udp |
