| Basic Information | |
|---|---|
| Species | Arabidopsis thaliana |
| Cazyme ID | AT5G61130.1 |
| Family | CBM43 |
| Protein Properties | Length: 202 Molecular Weight: 20364.6 Isoelectric Point: 7.5709 |
| Chromosome | Chromosome/Scaffold: 5 Start: 24587213 End: 24589580 |
| Description | X8 domain containing protein, expressed |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CBM43 | 21 | 102 | 3.7e-30 |
| WCVCKTGLSDTVLQATLDYACGNGADCNPTKPKQSCFNPDNVRSHCNYAVNSFFQKKGQSPGSCNFDGTATPTNSDPSYTGC | |||
| Full Sequence |
|---|
| Protein Sequence Length: 202 Download |
| MAALVLSLLL LSLAGHSSAS WCVCKTGLSD TVLQATLDYA CGNGADCNPT KPKQSCFNPD 60 NVRSHCNYAV NSFFQKKGQS PGSCNFDGTA TPTNSDPSYT GCAFPTSASG SSGSTTVTPG 120 TTNPKGSPTT TTLPGSGTNS PYSGNPTNGV FGGNSTGGTT GTGINPDYTT DSSAFALKNS 180 SKLFICLLLI ASSGFCSFLM L* 240 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam07983 | X8 | 3.0e-17 | 21 | 91 | 76 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
| smart00768 | X8 | 5.0e-33 | 21 | 104 | 84 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005886 | plasma membrane |
| GO:0009505 | plant-type cell wall |
| GO:0009506 | plasmodesma |
| GO:0030247 | polysaccharide binding |
| GO:0031225 | anchored to membrane |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAM64809.1 | 0 | 1 | 201 | 1 | 193 | unknown [Arabidopsis thaliana] |
| RefSeq | NP_196417.1 | 0 | 1 | 201 | 1 | 193 | E13L3 (GLUCAN ENDO-1,3-BETA-GLUCOSIDASE-LIKE PROTEIN 3); callose binding / polysaccharide binding [Arabidopsis thaliana] |
| RefSeq | NP_200921.2 | 0 | 1 | 201 | 1 | 201 | PDCB1 (PLASMODESMATA CALLOSE-BINDING PROTEIN 1); callose binding / polysaccharide binding [Arabidopsis thaliana] |
| RefSeq | NP_564059.1 | 0 | 1 | 190 | 1 | 176 | PDCB3 (PLASMODESMATA CALLOSE-BINDING PROTEIN 3); callose binding / polysaccharide binding [Arabidopsis thaliana] |
| RefSeq | XP_002284112.1 | 0 | 1 | 189 | 1 | 199 | PREDICTED: hypothetical protein [Vitis vinifera] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2jon_A | 7e-22 | 17 | 106 | 9 | 98 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |
