| Basic Information | |
|---|---|
| Species | Arabidopsis thaliana |
| Cazyme ID | AT5G61680.1 |
| Family | CE8 |
| Protein Properties | Length: 339 Molecular Weight: 37323.5 Isoelectric Point: 9.3459 |
| Chromosome | Chromosome/Scaffold: 5 Start: 24786416 End: 24788015 |
| Description | pectinesterase, putative, expressed |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CE8 | 44 | 327 | 0 |
| NVKQNGRGHFKTITEAINSVRAGNTRRVIIKIGPGVYKEKVTIDRSKPFITLYGHPNAMPVLTFDGTAAQYGTVDSATLIVLSDYFMAVNIILKNSAPMP DGKRKGAQALSMRISGNKAAFYNCKFYGYQDTICDDTGNHFFKDCYIEGTFDFIFGSGRSLYLGTQLNVVGDGIRVITAHAGKSAAEKSGYSFVHCKVTG TGTGIYLGRSWMSHPKVVYAYTDMSSVVNPSGWQENREAGRDKTVFYGEYKCTGTGSHKEKRVKYTQDIDDIEAKYFISLGYIQ | |||
| Full Sequence |
|---|
| Protein Sequence Length: 339 Download |
| MGYNYVSLIV TILLVVITSP VVFGNDAAPI PENKGRIEQW FNTNVKQNGR GHFKTITEAI 60 NSVRAGNTRR VIIKIGPGVY KEKVTIDRSK PFITLYGHPN AMPVLTFDGT AAQYGTVDSA 120 TLIVLSDYFM AVNIILKNSA PMPDGKRKGA QALSMRISGN KAAFYNCKFY GYQDTICDDT 180 GNHFFKDCYI EGTFDFIFGS GRSLYLGTQL NVVGDGIRVI TAHAGKSAAE KSGYSFVHCK 240 VTGTGTGIYL GRSWMSHPKV VYAYTDMSSV VNPSGWQENR EAGRDKTVFY GEYKCTGTGS 300 HKEKRVKYTQ DIDDIEAKYF ISLGYIQGSS WLLPPPSF* 360 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02634 | PLN02634 | 8.0e-81 | 45 | 334 | 298 | + probable pectinesterase | ||
| PLN02304 | PLN02304 | 2.0e-85 | 45 | 334 | 299 | + probable pectinesterase | ||
| PLN02432 | PLN02432 | 8.0e-86 | 45 | 332 | 288 | + putative pectinesterase | ||
| PLN02682 | PLN02682 | 2.0e-101 | 46 | 334 | 296 | + pectinesterase family protein | ||
| PLN02665 | PLN02665 | 0 | 23 | 338 | 343 | + pectinesterase family protein | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005618 | cell wall |
| GO:0009505 | plant-type cell wall |
| GO:0012505 | endomembrane system |
| GO:0030599 | pectinesterase activity |
| GO:0042545 | cell wall modification |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAG52566.1 | 0 | 21 | 338 | 1 | 338 | AC010675_14 putative pectin methylesterase; 8433-9798 [Arabidopsis thaliana] |
| DDBJ | BAB09012.1 | 0 | 1 | 338 | 1 | 364 | pectin methylesterase-like protein [Arabidopsis thaliana] |
| RefSeq | NP_177152.2 | 0 | 1 | 338 | 1 | 361 | PPME1; pectinesterase [Arabidopsis thaliana] |
| RefSeq | NP_200976.1 | 0 | 1 | 338 | 1 | 338 | pectinesterase family protein [Arabidopsis thaliana] |
| RefSeq | NP_568181.1 | 0 | 1 | 338 | 1 | 361 | pectinesterase family protein [Arabidopsis thaliana] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1gq8_A | 6e-33 | 42 | 332 | 8 | 308 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 1xg2_A | 3e-32 | 42 | 332 | 4 | 304 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 1qjv_B | 5e-18 | 53 | 316 | 18 | 327 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
| PDB | 1qjv_A | 5e-18 | 53 | 316 | 18 | 327 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
| PDB | 2ntq_B | 5e-18 | 53 | 316 | 18 | 327 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| homogalacturonan degradation | RXN-2102 | EC-3.1.1.11 | pectinesterase |
