| Basic Information | |
|---|---|
| Species | Arabidopsis thaliana |
| Cazyme ID | AT5G63230.1 |
| Family | CBM43 |
| Protein Properties | Length: 112 Molecular Weight: 12321.9 Isoelectric Point: 4.8473 |
| Chromosome | Chromosome/Scaffold: 5 Start: 25357360 End: 25357822 |
| Description | X8 domain containing protein, expressed |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CBM43 | 26 | 107 | 2.4e-32 |
| WCTPMPNTSDEQLQANIDFACSNGVDCTPIQPGGNCYNPNTLFDHASYVMNAYYHSHGRVEDACRFNRSGCFVVVDPSKDSC | |||
| Full Sequence |
|---|
| Protein Sequence Length: 112 Download |
| MSSLQLLTLL LLISTVSIPV VTCRQWCTPM PNTSDEQLQA NIDFACSNGV DCTPIQPGGN 60 CYNPNTLFDH ASYVMNAYYH SHGRVEDACR FNRSGCFVVV DPSKDSCVYY T* 120 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam07983 | X8 | 9.0e-22 | 25 | 95 | 76 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
| smart00768 | X8 | 8.0e-37 | 25 | 109 | 85 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0003674 | molecular_function |
| GO:0008150 | biological_process |
| GO:0012505 | endomembrane system |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| DDBJ | BAB10565.1 | 0 | 1 | 105 | 1 | 103 | unnamed protein product [Arabidopsis thaliana] |
| DDBJ | BAB10565.1 | 5.60519e-45 | 24 | 111 | 91 | 178 | unnamed protein product [Arabidopsis thaliana] |
| RefSeq | NP_001078788.1 | 0 | 3 | 111 | 2 | 110 | unknown protein [Arabidopsis thaliana] |
| RefSeq | NP_200173.1 | 3e-37 | 3 | 109 | 2 | 110 | glycosyl hydrolase family protein 17 [Arabidopsis thaliana] |
| RefSeq | NP_201128.2 | 0 | 1 | 111 | 1 | 111 | unknown protein [Arabidopsis thaliana] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2jon_A | 5e-25 | 26 | 109 | 13 | 96 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |
