Basic Information | |
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Species | Arabidopsis thaliana |
Cazyme ID | AT5G63250.1 |
Family | CBM43 |
Protein Properties | Length: 133 Molecular Weight: 14658.5 Isoelectric Point: 4.7779 |
Chromosome | Chromosome/Scaffold: 5 Start: 25360121 End: 25360689 |
Description | glucan endo-1,3-beta-glucosidase precursor, putative, expressed |
View CDS |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 42 | 126 | 4.9e-33 |
WCVANKKATDEQLQANIDWCCSYEGGFRDCTQINPGGVCYEPNTLRDHASYVMNLYYQNLGRTKDQCTFNGSGSEVTKDPSHDAC |
Full Sequence |
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Protein Sequence Length: 133 Download |
MVTKTKTMSL SLTLLLFILV STVSVTSTLE NLSPAAENKG YWCVANKKAT DEQLQANIDW 60 CCSYEGGFRD CTQINPGGVC YEPNTLRDHA SYVMNLYYQN LGRTKDQCTF NGSGSEVTKD 120 PSHDACIFIS YD* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam07983 | X8 | 4.0e-20 | 42 | 115 | 79 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 8.0e-34 | 42 | 128 | 87 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. |
Gene Ontology | |
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GO Term | Description |
GO:0003674 | molecular_function |
GO:0008150 | biological_process |
GO:0012505 | endomembrane system |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | NP_001031243.1 | 1e-28 | 8 | 128 | 1 | 110 | unknown protein [Arabidopsis thaliana] |
RefSeq | NP_176859.1 | 5e-29 | 22 | 128 | 6 | 110 | glycosyl hydrolase family protein 17 [Arabidopsis thaliana] |
RefSeq | NP_192648.2 | 9e-27 | 11 | 130 | 6 | 116 | glycosyl hydrolase family protein 17 [Arabidopsis thaliana] |
RefSeq | NP_201129.1 | 0 | 5 | 131 | 3 | 129 | glycosyl hydrolase family protein 17 [Arabidopsis thaliana] |
RefSeq | NP_201130.1 | 0 | 1 | 132 | 1 | 132 | glycosyl hydrolase family protein 17 [Arabidopsis thaliana] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2jon_A | 1e-23 | 33 | 130 | 4 | 98 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |