Basic Information | |
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Species | Arabidopsis thaliana |
Cazyme ID | AT5G65685.1 |
Family | GT5 |
Protein Properties | Length: 461 Molecular Weight: 52063.6 Isoelectric Point: 6.2693 |
Chromosome | Chromosome/Scaffold: 5 Start: 26273132 End: 26275919 |
Description | glycogen synthase 1, putative, expressed |
View CDS |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT5 | 192 | 442 | 0 |
HVIHICTEMAPLVSVGPLASYITGLSCALQEEGYMVEVILPKYSTLDLDEIEGLREIEADAYSYFDGQLHANRIWNGVVSGIGVTLIQPVYYSSMFSRDK VYGYQDDFDRFAYFSRASLDYIAKSGKQPDVLHIHNWQTAIVGPLFWDVFVNQGLEGTRILLTCQDFDKGLVPPEKLELCGLDPAELHRLDRLQDNTNPH FVNILKGGVVYSNKVVIMSSSHSSIPGLEPTLAIHKDKLFFAPFGMDNSME |
Full Sequence |
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Protein Sequence Length: 461 Download |
MQATANLPTI WNLSLRGSSS KVHIVNPRHR KSHALHCLRS EGHEEFDNSQ KSLGQSSITK 60 EAKHKDIWNL FREAQKNIMI LNKQRLAAVD ELEQLKKDKE ELLERINQLE AESQIVIKKD 120 KSSLFWELLL RIDSMVINGL VNIEEASSMR KLVKEHEANI SVFPLDVLQQ GDAEILAELR 180 RFTNKGKRNG LHVIHICTEM APLVSVGPLA SYITGLSCAL QEEGYMVEVI LPKYSTLDLD 240 EIEGLREIEA DAYSYFDGQL HANRIWNGVV SGIGVTLIQP VYYSSMFSRD KVYGYQDDFD 300 RFAYFSRASL DYIAKSGKQP DVLHIHNWQT AIVGPLFWDV FVNQGLEGTR ILLTCQDFDK 360 GLVPPEKLEL CGLDPAELHR LDRLQDNTNP HFVNILKGGV VYSNKVVIMS SSHSSIPGLE 420 PTLAIHKDKL FFAPFGMDNS MEKDLCCDLH VSAYTSIKNL * |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PRK00654 | glgA | 4.0e-39 | 191 | 430 | 250 | + glycogen synthase; Provisional | ||
cd03791 | GT1_Glycogen_synthase_DULL1_like | 9.0e-43 | 192 | 431 | 259 | + This family is most closely related to the GT1 family of glycosyltransferases. Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms. | ||
TIGR02095 | glgA | 3.0e-44 | 191 | 460 | 284 | + glycogen/starch synthase, ADP-glucose type. This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate [Energy metabolism, Biosynthesis and degradation of polysaccharides]. | ||
PLN02939 | PLN02939 | 6.0e-82 | 120 | 429 | 318 | + transferase, transferring glycosyl groups |
Gene Ontology | |
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GO Term | Description |
GO:0009011 | starch synthase activity |
GO:0009507 | chloroplast |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAK91459.1 | 0 | 1 | 460 | 1 | 460 | At5g65691/F16M2.160 [Arabidopsis thaliana] |
GenBank | ACD13789.1 | 0 | 1 | 438 | 1 | 454 | starch synthase V precursor [Vitis vinifera] |
EMBL | CAA16689.1 | 0 | 135 | 427 | 1 | 265 | predicted protein [Arabidopsis thaliana] |
RefSeq | NP_569018.1 | 0 | 1 | 460 | 1 | 460 | soluble glycogen synthase-related [Arabidopsis thaliana] |
RefSeq | XP_002310316.1 | 0 | 64 | 440 | 64 | 445 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3guh_A | 0.000002 | 191 | 414 | 1 | 216 | A Chain A, Crystal Structure Of A Rice Os3bglu6 Beta-glucosidase |
PDB | 2r4u_A | 0.000002 | 191 | 414 | 1 | 216 | A Chain A, Crystal Structure Of A Rice Os3bglu6 Beta-glucosidase |
PDB | 2r4t_A | 0.000002 | 191 | 414 | 1 | 216 | A Chain A, Crystal Structure Of A Rice Os3bglu6 Beta-glucosidase |
PDB | 2qzs_A | 0.000002 | 191 | 414 | 1 | 216 | A Chain A, Crystal Structure Of Wild-Type E.Coli Gs In Complex With Adp And Glucose(Wtgsb) |
PDB | 3cx4_A | 0.000002 | 191 | 414 | 1 | 216 | A Chain A, Crystal Structure Of Wild-Type E.Coli Gs In Complex With Adp And Glucose(Wtgsb) |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
starch biosynthesis | GLYCOGENSYN-RXN | EC-2.4.1.21 | starch synthase |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
EX124729 | 236 | 171 | 405 | 0 |
AV784133 | 193 | 269 | 461 | 0 |
EL455989 | 283 | 166 | 440 | 0 |
DR370741 | 179 | 283 | 461 | 0 |
DK463354 | 254 | 1 | 251 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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