| Basic Information | |
|---|---|
| Species | Arabidopsis thaliana |
| Cazyme ID | AT5G65685.2 |
| Family | GT5 |
| Protein Properties | Length: 450 Molecular Weight: 50936.2 Isoelectric Point: 5.3324 |
| Chromosome | Chromosome/Scaffold: 5 Start: 26273132 End: 26275919 |
| Description | glycogen synthase 1, putative, expressed |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT5 | 181 | 431 | 0 |
| HVIHICTEMAPLVSVGPLASYITGLSCALQEEGYMVEVILPKYSTLDLDEIEGLREIEADAYSYFDGQLHANRIWNGVVSGIGVTLIQPVYYSSMFSRDK VYGYQDDFDRFAYFSRASLDYIAKSGKQPDVLHIHNWQTAIVGPLFWDVFVNQGLEGTRILLTCQDFDKGLVPPEKLELCGLDPAELHRLDRLQDNTNPH FVNILKGGVVYSNKVVIMSSSHSSIPGLEPTLAIHKDKLFFAPFGMDNSME | |||
| Full Sequence |
|---|
| Protein Sequence Length: 450 Download |
| MQATANLPTI WNLSLHFSFC SVRSEFFRSE GHEEFDNSQK SLGQSSITKE AKHKDIWNLF 60 REAQKNIMIL NKQRLAAVDE LEQLKKDKEE LLERINQLEA ESQIVIKKDK SSLFWELLLR 120 IDSMVINGLV NIEEASSMRK LVKEHEANIS VFPLDVLQQG DAEILAELRR FTNKGKRNGL 180 HVIHICTEMA PLVSVGPLAS YITGLSCALQ EEGYMVEVIL PKYSTLDLDE IEGLREIEAD 240 AYSYFDGQLH ANRIWNGVVS GIGVTLIQPV YYSSMFSRDK VYGYQDDFDR FAYFSRASLD 300 YIAKSGKQPD VLHIHNWQTA IVGPLFWDVF VNQGLEGTRI LLTCQDFDKG LVPPEKLELC 360 GLDPAELHRL DRLQDNTNPH FVNILKGGVV YSNKVVIMSS SHSSIPGLEP TLAIHKDKLF 420 FAPFGMDNSM EKDLCCDLHV SAYTSIKNL* 480 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PRK00654 | glgA | 3.0e-39 | 180 | 419 | 250 | + glycogen synthase; Provisional | ||
| cd03791 | GT1_Glycogen_synthase_DULL1_like | 9.0e-43 | 181 | 420 | 259 | + This family is most closely related to the GT1 family of glycosyltransferases. Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms. | ||
| TIGR02095 | glgA | 3.0e-44 | 180 | 449 | 284 | + glycogen/starch synthase, ADP-glucose type. This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate [Energy metabolism, Biosynthesis and degradation of polysaccharides]. | ||
| PLN02939 | PLN02939 | 3.0e-82 | 109 | 418 | 318 | + transferase, transferring glycosyl groups | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0009011 | starch synthase activity |
| GO:0009507 | chloroplast |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAK91459.1 | 0 | 1 | 449 | 1 | 460 | At5g65691/F16M2.160 [Arabidopsis thaliana] |
| GenBank | ACD13789.1 | 0 | 30 | 427 | 53 | 454 | starch synthase V precursor [Vitis vinifera] |
| EMBL | CAA16689.1 | 0 | 124 | 416 | 1 | 265 | predicted protein [Arabidopsis thaliana] |
| RefSeq | NP_569018.1 | 0 | 1 | 449 | 1 | 460 | soluble glycogen synthase-related [Arabidopsis thaliana] |
| RefSeq | XP_002310316.1 | 0 | 53 | 429 | 64 | 445 | predicted protein [Populus trichocarpa] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3cx4_A | 0.000002 | 180 | 403 | 1 | 216 | A Chain A, Crystal Structure Of Wild-Type E.Coli Gs In Complex With Adp And Glucose(Wtgsb) |
| PDB | 3cop_A | 0.000002 | 180 | 403 | 1 | 216 | A Chain A, Crystal Structure Of E.Coli Gs Mutant E377a In Complex With Adp And Acceptor Analogue Heppso |
| PDB | 3guh_A | 0.000002 | 180 | 403 | 1 | 216 | A Chain A, Crystal Structure Of E.Coli Gs Mutant E377a In Complex With Adp And Acceptor Analogue Heppso |
| PDB | 2r4u_A | 0.000002 | 180 | 403 | 1 | 216 | A Chain A, Crystal Structure Of E.Coli Gs Mutant E377a In Complex With Adp And Acceptor Analogue Heppso |
| PDB | 2r4t_A | 0.000002 | 180 | 403 | 1 | 216 | A Chain A, Crystal Structure Of E.Coli Gs Mutant E377a In Complex With Adp And Acceptor Analogue Heppso |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| starch biosynthesis | GLYCOGENSYN-RXN | EC-2.4.1.21 | starch synthase |
| Hydropathy |
|---|
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| EX124729 | 236 | 160 | 394 | 0 |
| AV784133 | 193 | 258 | 450 | 0 |
| EL455989 | 283 | 155 | 429 | 0 |
| DR370741 | 179 | 272 | 450 | 0 |
| CD837426 | 195 | 160 | 353 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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