| Basic Information | |
|---|---|
| Species | Arabidopsis thaliana |
| Cazyme ID | AT5G67460.1 |
| Family | CBM43 |
| Protein Properties | Length: 381 Molecular Weight: 41995.8 Isoelectric Point: 8.1601 |
| Chromosome | Chromosome/Scaffold: 5 Start: 26921584 End: 26923274 |
| Description | glucan endo-1,3-beta-glucosidase-related, putative, expressed |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CBM43 | 293 | 375 | 1.3e-33 |
| WCVAKPSVAAETLQQSLDFACGQGGANCDEIKPHGICYYPDTVMAHASYAFNSYWQKTKRNGGTCSFGGTAMLITTDPSYQHC | |||
| Full Sequence |
|---|
| Protein Sequence Length: 381 Download |
| MRHLLYIFLF IAFLSFAGAG QESTPIEALN LNNNLLQLPQ TTDLDLAVSV SGNKTITEIS 60 SSIIKAETWL KTHILSRYPS TKITTIVIFF PDSCQTTQHS SDLVLSSLKN IYHSLTRWGL 120 ENNIKVSSGF SYQCLNNPKS SEMFKPVLIF LKTINSTFTI NPPQNFLTSP HNHRDLLHSV 180 EKLGSLSFNK VNFLNPEPEQ ESTTTMTRRN LRSLVNLSSK FTTSFPTLPS PSPETSPIHS 240 SIGSPSPPTI PYFPEPSQSP MESNQGISLP PCLPYHPAPS PQPVKKKNVE GLWCVAKPSV 300 AAETLQQSLD FACGQGGANC DEIKPHGICY YPDTVMAHAS YAFNSYWQKT KRNGGTCSFG 360 GTAMLITTDP SYQHCRFVLS * 420 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam00332 | Glyco_hydro_17 | 5.0e-5 | 52 | 161 | 120 | + Glycosyl hydrolases family 17. | ||
| pfam07983 | X8 | 3.0e-24 | 292 | 364 | 78 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
| smart00768 | X8 | 2.0e-41 | 292 | 377 | 86 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0003824 | catalytic activity |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| GO:0012505 | endomembrane system |
| GO:0043169 | cation binding |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACU22745.1 | 0 | 180 | 380 | 1 | 206 | unknown [Glycine max] |
| EMBL | CBI33700.1 | 0 | 7 | 380 | 11 | 357 | unnamed protein product [Vitis vinifera] |
| RefSeq | NP_201547.1 | 0 | 1 | 380 | 1 | 380 | glycosyl hydrolase family protein 17 [Arabidopsis thaliana] |
| RefSeq | XP_002279597.1 | 0 | 7 | 380 | 11 | 413 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002525263.1 | 0 | 18 | 376 | 21 | 418 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2jon_A | 6e-20 | 280 | 377 | 2 | 96 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |
| PDB | 2cyg_A | 0.003 | 32 | 161 | 36 | 172 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
