y
Basic Information | |
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Species | Aquilegia coerulea |
Cazyme ID | Aquca_002_00624.1 |
Family | AA3 |
Protein Properties | Length: 500 Molecular Weight: 55176 Isoelectric Point: 5.2511 |
Chromosome | Chromosome/Scaffold: 2 Start: 4934769 End: 4936509 |
Description | Glucose-methanol-choline (GMC) oxidoreductase family protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
AA3 | 4 | 490 | 0 |
MSFDYIVVGGGTSGCPLAATLSERFTVLLVERGGSPFEDSLIMEKKNFLYPISLNNEFTSIVQKVVSEEGVVNFRGRVLGGSTAINGGVYSRTSKEHIAT TGWDEQLVMEAYEWVESRMVFEPKTLSPFQSYAKDIFVEAGILPFNGFCLEHVEGTKITGTLFDENEKRHCSAHLLEAGDRTKLTVLLNATVTNVIFSEG NGSKPRACGIRFINSYHNVDKSYEVYLNQLANSDSWGDIVLSAGAMGSPQILMLSGIGPSEHLDKFNITPLLNAPQVGQGISDNPCIFLALDVIDVPNPT ADPSQVVAITKNSKFLIQLGGSRLTSTTQRRSLLAKLSYPRSKGKLELNSTDPRKNPSLKFNYLLEKMDLDECVEMVQEMQKVARSMDSHLGTEYSEKIT KIIADQIKDKFETESMFSEEELRHFCKMYRTSYLHSIGGCNVGSVVDKDYKVYGVEGLRVVDASTLNDLMGTSPMGTLLMLGRYLGV |
Full Sequence |
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Protein Sequence Length: 500 Download |
MQGMSFDYIV VGGGTSGCPL AATLSERFTV LLVERGGSPF EDSLIMEKKN FLYPISLNNE 60 FTSIVQKVVS EEGVVNFRGR VLGGSTAING GVYSRTSKEH IATTGWDEQL VMEAYEWVES 120 RMVFEPKTLS PFQSYAKDIF VEAGILPFNG FCLEHVEGTK ITGTLFDENE KRHCSAHLLE 180 AGDRTKLTVL LNATVTNVIF SEGNGSKPRA CGIRFINSYH NVDKSYEVYL NQLANSDSWG 240 DIVLSAGAMG SPQILMLSGI GPSEHLDKFN ITPLLNAPQV GQGISDNPCI FLALDVIDVP 300 NPTADPSQVV AITKNSKFLI QLGGSRLTST TQRRSLLAKL SYPRSKGKLE LNSTDPRKNP 360 SLKFNYLLEK MDLDECVEMV QEMQKVARSM DSHLGTEYSE KITKIIADQI KDKFETESMF 420 SEEELRHFCK MYRTSYLHSI GGCNVGSVVD KDYKVYGVEG LRVVDASTLN DLMGTSPMGT 480 LLMLGRYLGV QMLNERGME* 540 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PRK02106 | PRK02106 | 9.0e-13 | 342 | 493 | 169 | + choline dehydrogenase; Validated | ||
PRK02106 | PRK02106 | 3.0e-28 | 1 | 286 | 329 | + choline dehydrogenase; Validated | ||
TIGR03970 | Rv0697 | 1.0e-39 | 7 | 485 | 518 | + dehydrogenase, Rv0697 family. This model describes a set of dehydrogenases belonging to the glucose-methanol-choline oxidoreductase (GMC oxidoreductase) family. Members of the present family are restricted to Actinobacterial genome contexts containing also members of families TIGR03962 and TIGR03969 (the mycofactocin system), and are proposed to be uniform in function. | ||
COG2303 | BetA | 3.0e-41 | 1 | 497 | 583 | + Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism] | ||
PLN02785 | PLN02785 | 2.0e-135 | 5 | 496 | 554 | + Protein HOTHEAD |
Gene Ontology | |
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GO Term | Description |
GO:0016614 | oxidoreductase activity, acting on CH-OH group of donors |
GO:0050660 | flavin adenine dinucleotide binding |
GO:0055114 | oxidation-reduction process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | NP_172871.1 | 0 | 1 | 496 | 11 | 483 | glucose-methanol-choline (GMC) oxidoreductase family protein [Arabidopsis thaliana] |
RefSeq | XP_002312249.1 | 0 | 1 | 495 | 8 | 486 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002315047.1 | 0 | 1 | 495 | 14 | 489 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002315048.1 | 0 | 3 | 496 | 47 | 526 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002522448.1 | 0 | 1 | 496 | 45 | 525 | glucose-methanol-choline (gmc) oxidoreductase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3red_L | 0 | 5 | 496 | 26 | 518 | A Chain A, 3.0 A Structure Of The Prunus Mume Hydroxynitrile Lyase Isozyme-1 |
PDB | 3red_K | 0 | 5 | 496 | 26 | 518 | A Chain A, 3.0 A Structure Of The Prunus Mume Hydroxynitrile Lyase Isozyme-1 |
PDB | 3red_J | 0 | 5 | 496 | 26 | 518 | A Chain A, 3.0 A Structure Of The Prunus Mume Hydroxynitrile Lyase Isozyme-1 |
PDB | 3red_I | 0 | 5 | 496 | 26 | 518 | A Chain A, 3.0 A Structure Of The Prunus Mume Hydroxynitrile Lyase Isozyme-1 |
PDB | 3red_H | 0 | 5 | 496 | 26 | 518 | A Chain A, 3.0 A Structure Of The Prunus Mume Hydroxynitrile Lyase Isozyme-1 |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
DR931779 | 273 | 209 | 481 | 0 |
DR939299 | 282 | 222 | 500 | 0 |
JZ007124 | 249 | 75 | 321 | 0 |
DR931780 | 198 | 5 | 202 | 0 |
DR931779 | 22 | 478 | 499 | 0.01 |
Sequence Alignments (This image is cropped. Click for full image.) |
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