Basic Information | |
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Species | Aquilegia coerulea |
Cazyme ID | Aquca_003_00413.1 |
Family | GH10 |
Protein Properties | Length: 539 Molecular Weight: 60438.2 Isoelectric Point: 6.6184 |
Chromosome | Chromosome/Scaffold: 3 Start: 5770649 End: 5773061 |
Description | Glycosyl hydrolase family 10 protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH10 | 168 | 448 | 0 |
QNKPSFPFGSAMNKNILTNTAYQNWFTSRFAVTTFENEMKWYSNEASPGKEDYSVSDAMLQFAKQHGIAVRGHNIFWDDDSYQPGWVKSLSLDQLKAATE KRINSVVSKYAGQVIAWDVVNENLHFSFFEDRLGKTFTGIMFEKTHQLDSKATMFLNDYNTIEESGDRKTTPTQYVKKIREIQSSLHSKNAPIAIGLEGH FRVPNVAYMRSAMDTLAATGLPIWLTELDIEKHPKQVLLRLLKQDYQIDISLFSAEYLEEVLREVHSHPAVQGIILWTAWI |
Full Sequence |
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Protein Sequence Length: 539 Download |
GAIEALSYDY SSTIECIAEP LKPQYGGGII TNPEFNNGLD GWSEYGDGLI GKRQSKQGNN 60 FVAARTRTNP HDSFSHKIYL EKENLYTFSA WIQVSEGKEA VTAVIKTSKA HEIVGTVVAE 120 YGCWSMLKGG LSVNSSGPAK LYFEMKVRIH AIDSEGQIIG GAKVSIKQNK PSFPFGSAMN 180 KNILTNTAYQ NWFTSRFAVT TFENEMKWYS NEASPGKEDY SVSDAMLQFA KQHGIAVRGH 240 NIFWDDDSYQ PGWVKSLSLD QLKAATEKRI NSVVSKYAGQ VIAWDVVNEN LHFSFFEDRL 300 GKTFTGIMFE KTHQLDSKAT MFLNDYNTIE ESGDRKTTPT QYVKKIREIQ SSLHSKNAPI 360 AIGLEGHFRV PNVAYMRSAM DTLAATGLPI WLTELDIEKH PKQVLLRLLK QDYQIDISLF 420 SAEYLEEVLR EVHSHPAVQG IILWTAWIPN GCYRMCLTDN NFKNLPTGDV VDKLISEWTQ 480 KNLVGTTNNN GFFETSLFHG DYEVEITHPK RNSSLAQNFK VTAIESSQGT TLQLHINI* 540 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
cd08908 | START_STARD12-like | 0.005 | 388 | 478 | 104 | + C-terminal lipid-binding START domain of mammalian STARD12 and related proteins, which also have an N-terminal Rho GTPase-activating protein (RhoGAP) domain. This subgroup includes the steroidogenic acute regulatory protein (StAR)-related lipid transfer (START) domains of STARD12 (also known as DLC-1, Arhgap7, and p122-RhoGAP) and related proteins. It belongs to the START domain family, and in turn to the SRPBCC (START/RHO_alpha_C/PITP/Bet_v1/CoxG/CalC) domain superfamily of proteins that bind hydrophobic ligands. SRPBCC domains have a deep hydrophobic ligand-binding pocket. Proteins belonging to this subgroup also have an N-terminal SAM (sterile alpha motif) domain and a RhoGAP domain, and have a SAM-RhoGAP-START domain organization. The precise function of the START domain in this subgroup is unclear. | ||
COG3693 | XynA | 6.0e-36 | 197 | 397 | 213 | + Beta-1,4-xylanase [Carbohydrate transport and metabolism] | ||
pfam00331 | Glyco_hydro_10 | 3.0e-60 | 170 | 463 | 311 | + Glycosyl hydrolase family 10. | ||
smart00633 | Glyco_10 | 5.0e-80 | 206 | 471 | 285 | + Glycosyl hydrolase family 10. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
GO:0016798 | hydrolase activity, acting on glycosyl bonds |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI22450.1 | 0 | 2 | 523 | 43 | 579 | unnamed protein product [Vitis vinifera] |
EMBL | CBI22450.1 | 0 | 12 | 525 | 587 | 1116 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002264556.1 | 0 | 2 | 523 | 106 | 642 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002264605.1 | 0 | 2 | 525 | 21 | 560 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002532418.1 | 0 | 5 | 521 | 20 | 554 | Endo-1,4-beta-xylanase C precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1nq6_A | 1e-28 | 175 | 398 | 15 | 239 | A Chain A, Crystal Structure Of The Catalytic Domain Of Xylanase A From Streptomyces Halstedii Jm8 |
PDB | 1ta3_B | 1e-28 | 175 | 409 | 17 | 253 | B Chain B, Crystal Structure Of Xylanase (Gh10) In Complex With Inhibitor (Xip) |
PDB | 1tux_A | 5e-26 | 175 | 397 | 18 | 240 | A Chain A, High Resolution Crystal Structure Of A Thermostable Xylanase From Thermoascus Aurantiacus |
PDB | 1v6y_A | 2e-25 | 175 | 450 | 16 | 286 | A Chain A, Crystal Structure Of Chimeric Xylanase Between Streptomyces Olivaceoviridis E-86 Fxyn And Cellulomonas Fimi Cex |
PDB | 1e0v_A | 3e-25 | 175 | 401 | 16 | 243 | A Chain A, Xylanase 10a From Sreptomyces Lividans. Cellobiosyl-Enzyme Intermediate At 1.7 A |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
EX266128 | 312 | 188 | 497 | 0 |
FL914612 | 246 | 147 | 391 | 0 |
BI312030 | 263 | 280 | 539 | 0 |
GR186303 | 265 | 216 | 480 | 0 |
EX266128 | 43 | 483 | 521 | 0.043 |
Sequence Alignments (This image is cropped. Click for full image.) |
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