y
Basic Information | |
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Species | Aquilegia coerulea |
Cazyme ID | Aquca_003_00441.1 |
Family | CE8 |
Protein Properties | Length: 394 Molecular Weight: 44051.8 Isoelectric Point: 8.6193 |
Chromosome | Chromosome/Scaffold: 3 Start: 6114812 End: 6117127 |
Description | Pectin lyase-like superfamily protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 93 | 382 | 0 |
RVSPDGGGDFRTIQEAIDCIPLNNTRRVILQIQPGIYREKIVIPRSLPFVTFLGDSNDTPTITGNDTASSVSQKDGMPLKTFQSATVAVNANYFVAINIK FENTAPHDIGSVGEQAVALRISGNKAAFYNCSFYGTQDTLYDHKGLHYFNNCFIQGSVDFIFGYGRSLYENCYLNSIAKKVASLTAQKRNNASLSSGFSF KNSVITGSGQVYLGRAWGDQSRVVFSYTFMDKVVLPQGWSNWGDQKRQQSVYYGEYKCSGPGANQERRVPWARMLTDEEAEPFTGTHYVD |
Full Sequence |
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Protein Sequence Length: 394 Download |
MLTLSDFPQL PQYHNMASIS HIHLLLFLLS LSALYLESLS LSSEGEREYQ KWLSWNVENH 60 RAKAIFEAKA VATGKKVVDE KLRKAELHKV RIRVSPDGGG DFRTIQEAID CIPLNNTRRV 120 ILQIQPGIYR EKIVIPRSLP FVTFLGDSND TPTITGNDTA SSVSQKDGMP LKTFQSATVA 180 VNANYFVAIN IKFENTAPHD IGSVGEQAVA LRISGNKAAF YNCSFYGTQD TLYDHKGLHY 240 FNNCFIQGSV DFIFGYGRSL YENCYLNSIA KKVASLTAQK RNNASLSSGF SFKNSVITGS 300 GQVYLGRAWG DQSRVVFSYT FMDKVVLPQG WSNWGDQKRQ QSVYYGEYKC SGPGANQERR 360 VPWARMLTDE EAEPFTGTHY VDGNSWLLNP LNL* 420 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02634 | PLN02634 | 1.0e-107 | 88 | 387 | 303 | + probable pectinesterase | ||
PLN02432 | PLN02432 | 1.0e-110 | 92 | 387 | 296 | + putative pectinesterase | ||
PLN02671 | PLN02671 | 4.0e-111 | 92 | 387 | 298 | + pectinesterase | ||
PLN02665 | PLN02665 | 6.0e-135 | 51 | 393 | 346 | + pectinesterase family protein | ||
PLN02682 | PLN02682 | 2.0e-144 | 46 | 389 | 346 | + pectinesterase family protein |
Gene Ontology | |
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GO Term | Description |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAN79461.1 | 0 | 16 | 390 | 1 | 381 | hypothetical protein [Vitis vinifera] |
GenBank | EEC69509.1 | 0 | 49 | 390 | 70 | 411 | hypothetical protein OsI_38743 [Oryza sativa Indica Group] |
RefSeq | NP_001067039.1 | 0 | 49 | 390 | 69 | 410 | Os12g0563700 [Oryza sativa (japonica cultivar-group)] |
RefSeq | XP_002320279.1 | 0 | 100 | 387 | 1 | 287 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002443368.1 | 0 | 70 | 393 | 101 | 431 | hypothetical protein SORBIDRAFT_08g018360 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 0 | 92 | 387 | 9 | 308 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 2.94273e-44 | 94 | 387 | 7 | 304 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 3uw0_A | 3e-20 | 99 | 376 | 41 | 353 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
PDB | 2ntq_B | 2e-19 | 85 | 376 | 1 | 329 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
PDB | 2ntq_A | 2e-19 | 85 | 376 | 1 | 329 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |