Basic Information | |
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Species | Aquilegia coerulea |
Cazyme ID | Aquca_003_00510.1 |
Family | CE8 |
Protein Properties | Length: 337 Molecular Weight: 38194.8 Isoelectric Point: 7.9582 |
Chromosome | Chromosome/Scaffold: 3 Start: 6929859 End: 6931473 |
Description | Pectin lyase-like superfamily protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 18 | 320 | 0 |
ITIKASGGGDYKTISDAIDEGVPENNSKWIRIIVHSGTYKEKVVIPVNKPYIFLDGENWGNTVITYNGHINLQDSAFQVAADNFVARHITFKNTYNHDYK VLQGNKNPQAQAVAAFIQGDKNSFYQCSFIGLQDTLWDSLGRHFFQNCYIEGSVDFIFGDGQSVYEDLGMSFTVRFLEAKPDFYLNLKMYYKRNPDQVFI TAHIRSKETEPTGFVFKYCNVIGTGPTLLGRAWGPYSRVLYYKTQFADIISPEGWYAWGKNNETNLFYAEEDCTGPGSDTSKRVAWQKKLTPAEVNFFTG SSF |
Full Sequence |
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Protein Sequence Length: 337 Download |
LSDAAAVASP PTRFSKTITI KASGGGDYKT ISDAIDEGVP ENNSKWIRII VHSGTYKEKV 60 VIPVNKPYIF LDGENWGNTV ITYNGHINLQ DSAFQVAADN FVARHITFKN TYNHDYKVLQ 120 GNKNPQAQAV AAFIQGDKNS FYQCSFIGLQ DTLWDSLGRH FFQNCYIEGS VDFIFGDGQS 180 VYEDLGMSFT VRFLEAKPDF YLNLKMYYKR NPDQVFITAH IRSKETEPTG FVFKYCNVIG 240 TGPTLLGRAW GPYSRVLYYK TQFADIISPE GWYAWGKNNE TNLFYAEEDC TGPGSDTSKR 300 VAWQKKLTPA EVNFFTGSSF NNKDHWIENQ PIRRRR* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02480 | PLN02480 | 9.0e-81 | 16 | 327 | 315 | + Probable pectinesterase | ||
PLN02432 | PLN02432 | 1.0e-81 | 18 | 327 | 312 | + putative pectinesterase | ||
PLN02682 | PLN02682 | 5.0e-85 | 15 | 329 | 328 | + pectinesterase family protein | ||
PLN02176 | PLN02176 | 1.0e-89 | 12 | 333 | 326 | + putative pectinesterase | ||
PLN02497 | PLN02497 | 1.0e-107 | 8 | 332 | 327 | + probable pectinesterase |
Gene Ontology | |
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GO Term | Description |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI40838.1 | 0 | 9 | 331 | 35 | 341 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002263748.1 | 0 | 17 | 331 | 31 | 328 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002268029.1 | 0 | 11 | 332 | 22 | 320 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002275096.1 | 0 | 9 | 331 | 182 | 469 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002529267.1 | 0 | 15 | 331 | 37 | 337 | Pectinesterase-2 precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 6.99949e-42 | 18 | 328 | 9 | 309 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 2e-34 | 20 | 332 | 7 | 309 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 1qjv_B | 2e-17 | 12 | 187 | 2 | 190 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 1qjv_A | 2e-17 | 12 | 187 | 2 | 190 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 2ntq_B | 2e-17 | 12 | 187 | 2 | 190 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
DV984237 | 314 | 27 | 334 | 0 |
EX315894 | 298 | 43 | 334 | 0 |
EX317112 | 297 | 44 | 334 | 0 |
FC372426 | 306 | 28 | 327 | 0 |
BY991187 | 295 | 39 | 327 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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