y
Basic Information | |
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Species | Aquilegia coerulea |
Cazyme ID | Aquca_004_00216.1 |
Family | AA3 |
Protein Properties | Length: 241 Molecular Weight: 26397 Isoelectric Point: 7.8503 |
Chromosome | Chromosome/Scaffold: 4 Start: 3614412 End: 3615646 |
Description | |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
AA3 | 18 | 182 | 1.5e-22 |
SYDAVVVGSGYGGSVAACRMSMAGIKVCLMEKGRKWEAQDFPTNSFNILSAFRMENKKWGFTFGAKDALIQVYEQEDSLAAVACGLGGGSLINAGVMVST PLRARRNKKWPKEWNNDWEVCEAYASNMLQAQSVPVEFPNAKVMRQMVADEIEECSPSSIKLSIN |
Full Sequence |
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Protein Sequence Length: 241 Download |
MERETHVNTK MLGDGECSYD AVVVGSGYGG SVAACRMSMA GIKVCLMEKG RKWEAQDFPT 60 NSFNILSAFR MENKKWGFTF GAKDALIQVY EQEDSLAAVA CGLGGGSLIN AGVMVSTPLR 120 ARRNKKWPKE WNNDWEVCEA YASNMLQAQS VPVEFPNAKV MRQMVADEIE ECSPSSIKLS 180 INFKSKEASS NSMGSQTTDS CRACGNCLSG CPYNAKNSTD KNYLASARTK NKEYIFIYLV 240 * 300 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG2303 | BetA | 0.002 | 36 | 228 | 215 | + Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism] | ||
pfam00732 | GMC_oxred_N | 7.0e-6 | 102 | 231 | 137 | + GMC oxidoreductase. This family of proteins bind FAD as a cofactor. |
Gene Ontology | |
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GO Term | Description |
GO:0009055 | electron carrier activity |
GO:0016491 | oxidoreductase activity |
GO:0016614 | oxidoreductase activity, acting on CH-OH group of donors |
GO:0050660 | flavin adenine dinucleotide binding |
GO:0055114 | oxidation-reduction process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAN62038.1 | 0 | 16 | 227 | 17 | 228 | hypothetical protein [Vitis vinifera] |
EMBL | CBI30327.1 | 0 | 1 | 224 | 1 | 224 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002333993.1 | 0 | 1 | 187 | 1 | 182 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002530344.1 | 0 | 1 | 228 | 1 | 228 | conserved hypothetical protein [Ricinus communis] |
RefSeq | XP_002530345.1 | 0 | 1 | 216 | 1 | 216 | hypothetical protein RCOM_0293450 [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3cox_A | 0.00000006 | 9 | 120 | 3 | 128 | A Chain A, Cellobiose Dehydrogenase Flavoprotein Fragment In Complex With Cellobionolactam |
PDB | 1coy_A | 0.00000006 | 9 | 120 | 3 | 128 | A Chain A, Crystal Structure Of Cholesterol Oxidase Complexed With A Steroid Substrate. Implications For Fad Dependent Alcohol Oxidases |
PDB | 1naa_B | 0.0008 | 17 | 50 | 1 | 34 | A Chain A, Cellobiose Dehydrogenase Flavoprotein Fragment In Complex With Cellobionolactam |
PDB | 1naa_A | 0.0008 | 17 | 50 | 1 | 34 | A Chain A, Cellobiose Dehydrogenase Flavoprotein Fragment In Complex With Cellobionolactam |
PDB | 1kdg_B | 0.0008 | 17 | 50 | 6 | 39 | A Chain A, Crystal Structure Of The Flavin Domain Of Cellobiose Dehydrogenase |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
DK958345 | 88 | 142 | 227 | 0.00000000001 |
FE865876 | 133 | 36 | 159 | 0.00000001 |
FE434698 | 31 | 197 | 227 | 0.0001 |
FE434699 | 31 | 197 | 227 | 0.0001 |
FC402129 | 203 | 37 | 236 | 0.42 |
Sequence Alignments (This image is cropped. Click for full image.) |
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