| Basic Information | |
|---|---|
| Species | Aquilegia coerulea |
| Cazyme ID | Aquca_005_00047.1 |
| Family | CBM53 |
| Protein Properties | Length: 1135 Molecular Weight: 128718 Isoelectric Point: 6.7997 |
| Chromosome | Chromosome/Scaffold: 5 Start: 519307 End: 535958 |
| Description | starch synthase 3 |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| CBM53 | 247 | 331 | 2.6e-31 |
| GQEIEVFLNRSFSALKNESNVLIMGAFNDWKWKSFTTKLNKTELKGDWWSCRVYVPKEAYNIDFVFFNGGSVYENNERKDFVVPV | |||
| CBM53 | 423 | 513 | 5.7e-32 |
| DMVRLYYNRSSGPLDNSKELWIHGGHNNWKEGVSFSGRLVRDVRKEDGDWWYAHVIVPDRALVLDWVFADGPPESATLYDNNQLQDFHAIV | |||
| CBM53 | 585 | 673 | 4.3e-34 |
| GNTITVIYNPSNTVLNEKPEVWFRCSFNRWTHPKGPLPPQKMLPTDSGSHVKVSVKIPLDAYIMDFVFSERQDGGTYDNNNGMDYHIPV | |||
| GT5 | 684 | 1127 | 0 |
| NIVHISVEMAPIAKVGGLGDVVTSLSRAVQDMGHNVDVILPKYDCMNLSNVKEFKFHQSYFWSGTEIKVWFGKVEGLSVYFLEPQNGMFWAGCIYGCRND GERFGFFCHAALEFLLRSGAHPDILHCHDWSSAPIAWLFKDHYRLHGLSKARVVFTIHNLEFGAHQIGKAMAYTDKATTVSSTYSKEVSGNPVIAPHLYK FHGIVNGIDPDIWDPYNDKFIPLSYTSDNVVEGKRTAKEALQQRLGLQKSDLPLVGIITRLTVQKGIHLIKHAIWRTLERNGQVVLLGSAPDPRIQNEFV NLANQLHSSHGDRARLCLTYDEPLSHLIYAGADFILVPSIFEPCGLTQLIAMRYGSIPVVRKTGGLYDTVFDVDHDKDRAQAQGLEPNGFNFDGADTAGV DYALNRAITAWYDGRDWFNSLCKQVMEQDWSWNRPALDYMELYY | |||
| Full Sequence |
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| Protein Sequence Length: 1135 Download |
| MEVALVVQTP IYCRTSISHC KFKPLVNGVF FHGRINPSSQ LSSWSDKYQG TGITSRVTAS 60 ADYSKRRSRK SPISRPGGTA PKGLKPKAPI GMSTHKRDQS DEEKDGSGTT SGIYTNLDRK 120 QAEKKIDDAE EKEMEKTSVT SRQSTVLKSD EKKNIEKLSG NEDSKLRNLG TPSKSQTEDK 180 VDGTTLAKKW SDVIASDGIQ ENETSEIRDD TSASKSIRYK QVLDDLAEEN FSRGSKMFVY 240 PQVVKPGQEI EVFLNRSFSA LKNESNVLIM GAFNDWKWKS FTTKLNKTEL KGDWWSCRVY 300 VPKEAYNIDF VFFNGGSVYE NNERKDFVVP VEGGMDEVSF EEFLLEEKRR ELEKLAAEQA 360 ERERLAEEQK RIEAEKAAIE ADKLQARSEA EQTRKMVHQI MKIAVKSLNN VWHIEPSEFK 420 GKDMVRLYYN RSSGPLDNSK ELWIHGGHNN WKEGVSFSGR LVRDVRKEDG DWWYAHVIVP 480 DRALVLDWVF ADGPPESATL YDNNQLQDFH AIVPNSIPED LYWVEEEHQI FTKLQEDRKL 540 KEEALRAKAE RTARVKAEAK EITMRKFLLS QKHIVYTEPL DVQAGNTITV IYNPSNTVLN 600 EKPEVWFRCS FNRWTHPKGP LPPQKMLPTD SGSHVKVSVK IPLDAYIMDF VFSERQDGGT 660 YDNNNGMDYH IPVFGGVSRE PPMNIVHISV EMAPIAKVGG LGDVVTSLSR AVQDMGHNVD 720 VILPKYDCMN LSNVKEFKFH QSYFWSGTEI KVWFGKVEGL SVYFLEPQNG MFWAGCIYGC 780 RNDGERFGFF CHAALEFLLR SGAHPDILHC HDWSSAPIAW LFKDHYRLHG LSKARVVFTI 840 HNLEFGAHQI GKAMAYTDKA TTVSSTYSKE VSGNPVIAPH LYKFHGIVNG IDPDIWDPYN 900 DKFIPLSYTS DNVVEGKRTA KEALQQRLGL QKSDLPLVGI ITRLTVQKGI HLIKHAIWRT 960 LERNGQVVLL GSAPDPRIQN EFVNLANQLH SSHGDRARLC LTYDEPLSHL IYAGADFILV 1020 PSIFEPCGLT QLIAMRYGSI PVVRKTGGLY DTVFDVDHDK DRAQAQGLEP NGFNFDGADT 1080 AGVDYALNRA ITAWYDGRDW FNSLCKQVME QDWSWNRPAL DYMELYYAAR KLGQ* 1140 |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02939 | PLN02939 | 7.0e-144 | 683 | 1129 | 494 | + transferase, transferring glycosyl groups | ||
| TIGR02095 | glgA | 9.0e-157 | 683 | 1129 | 489 | + glycogen/starch synthase, ADP-glucose type. This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate [Energy metabolism, Biosynthesis and degradation of polysaccharides]. | ||
| PRK00654 | glgA | 1.0e-167 | 683 | 1131 | 486 | + glycogen synthase; Provisional | ||
| cd03791 | GT1_Glycogen_synthase_DULL1_like | 1.0e-177 | 684 | 1127 | 489 | + This family is most closely related to the GT1 family of glycosyltransferases. Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms. | ||
| PLN02316 | PLN02316 | 0 | 78 | 1131 | 1066 | + synthase/transferase | ||
| Gene Ontology | |
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| GO Term | Description |
| GO:0009058 | biosynthetic process |
| GO:2001070 | starch binding |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| DDBJ | BAF49176.1 | 0 | 54 | 1132 | 51 | 1164 | starch synthase III [Phaseolus vulgaris] |
| EMBL | CAB40374.1 | 0 | 31 | 1132 | 13 | 1146 | Starch synthase isoform SS III [Vigna unguiculata] |
| RefSeq | XP_002269011.1 | 0 | 1 | 1131 | 1 | 1140 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002305571.1 | 0 | 74 | 1131 | 4 | 1017 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002518476.1 | 0 | 78 | 1131 | 8 | 1058 | starch synthase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3d1j_A | 0 | 683 | 1127 | 1 | 474 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
| PDB | 3guh_A | 0 | 683 | 1127 | 1 | 474 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
| PDB | 2r4u_A | 0 | 683 | 1127 | 1 | 474 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
| PDB | 2r4t_A | 0 | 683 | 1127 | 1 | 474 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
| PDB | 2qzs_A | 0 | 683 | 1127 | 1 | 474 | A Chain A, Crystal Structure Of Wild-Type E.Coli Gs In Complex With Adp And Glucose(Wtgsb) |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| HO778003 | 701 | 220 | 920 | 0 |
| HO794758 | 568 | 565 | 1132 | 0 |
| HO778003 | 310 | 387 | 673 | 9e-17 |
| HO778003 | 145 | 537 | 677 | 0.0006 |
| HO778003 | 142 | 203 | 335 | 0.022 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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