Basic Information | |
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Species | Aquilegia coerulea |
Cazyme ID | Aquca_011_00377.2 |
Family | PL1 |
Protein Properties | Length: 358 Molecular Weight: 39406.7 Isoelectric Point: 7.3623 |
Chromosome | Chromosome/Scaffold: 11 Start: 4748815 End: 4750884 |
Description | Pectin lyase-like superfamily protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
PL1 | 134 | 333 | 0 |
WIIFARDMTIQLKEELIMNSFKTLDGRGASVHIAGGPCITIQYVTNIIIHGLHIHDCKQGGNTLVRDSTKHFGFRTLSDGDGVSIFGGSHVWVDHCSLSN CRDGLIDAIHGSTAITLSNNYMTHHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEMYAIGGSAAPTINSQGNRFLA |
Full Sequence |
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Protein Sequence Length: 358 Download |
MKMAYSSSSS TLLLSLFCLF SLILLPTFIS SSPAAVQDPE LVAQEVVRQI NSTRRNLGYL 60 SCNTGNPIDD CWRCDSNWEK NRQRLADCAI GFGKQAIGGR DGRIYVVTDP GNDDPVTPKP 120 GTLRYAVIQE EPLWIIFARD MTIQLKEELI MNSFKTLDGR GASVHIAGGP CITIQYVTNI 180 IIHGLHIHDC KQGGNTLVRD STKHFGFRTL SDGDGVSIFG GSHVWVDHCS LSNCRDGLID 240 AIHGSTAITL SNNYMTHHDK VMLLGHSDSY TQDKNMQVTI AFNHFGEGLV QRMPRCRHGY 300 FHVVNNDYTH WEMYAIGGSA APTINSQGNR FLAPSRVDSK EKANGRIGIG GLKETCI* 360 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG3866 | PelB | 6.0e-27 | 153 | 331 | 191 | + Pectate lyase [Carbohydrate transport and metabolism] | ||
pfam00544 | Pec_lyase_C | 4.0e-71 | 146 | 331 | 209 | + Pectate lyase. This enzyme forms a right handed beta helix structure. Pectate lyase is an enzyme involved in the maceration and soft rotting of plant tissue. | ||
smart00656 | Amb_all | 1.0e-81 | 140 | 335 | 207 | + Amb_all domain. |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACU21247.1 | 0 | 26 | 341 | 18 | 333 | unknown [Glycine max] |
EMBL | CAN76500.1 | 0 | 26 | 341 | 17 | 330 | hypothetical protein [Vitis vinifera] |
EMBL | CBI14899.1 | 0 | 26 | 341 | 17 | 330 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002318694.1 | 0 | 26 | 341 | 17 | 330 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002322215.1 | 0 | 26 | 341 | 17 | 330 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1pxz_B | 0 | 66 | 348 | 2 | 284 | A Chain A, 1.7 Angstrom Crystal Structure Of Jun A 1, The Major Allergen From Cedar Pollen |
PDB | 1pxz_A | 0 | 66 | 348 | 2 | 284 | A Chain A, 1.7 Angstrom Crystal Structure Of Jun A 1, The Major Allergen From Cedar Pollen |
PDB | 3zsc_A | 1e-16 | 135 | 333 | 50 | 248 | A Chain A, Catalytic Function And Substrate Recognition Of The Pectate Lyase From Thermotoga Maritima |
PDB | 1bn8_A | 0.000000000000006 | 214 | 308 | 205 | 316 | A Chain A, Bacillus Subtilis Pectate Lyase |
PDB | 2bsp_A | 0.00000000000001 | 214 | 308 | 205 | 316 | A Chain A, Bacillus Subtilis Pectate Lyase R279k Mutant |