Basic Information | |
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Species | Aquilegia coerulea |
Cazyme ID | Aquca_015_00128.1 |
Family | CE8 |
Protein Properties | Length: 286 Molecular Weight: 31624.4 Isoelectric Point: 6.888 |
Chromosome | Chromosome/Scaffold: 15 Start: 885561 End: 886926 |
Description | Pectin lyase-like superfamily protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 9 | 276 | 0 |
SGGTYGTIQAAIDSVPSNNNNWIRIHVKRGIYREKVQIPLDKPYILLEGEGSKSTVIEWNDCDNIDKPAFGAYADNFVAKYIGFLTIEMRRRAVAAHIAG DKAAFYECGFYGLQDTLYDKCGRHYFKSCYIDGSVDFIFGNGQSIYEVCKWTSLQPGLAGFITAQGRESMNENTGFVFKQCSVFGSGTTYLGRARRAYSR VLFYQSDISDVVVPQGWNPGEYGGHEGTITYAEYGCKGSGSNTAGRVPWETKMDPKTANYFADISYIN |
Full Sequence |
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Protein Sequence Length: 286 Download |
SITTITVGSG GTYGTIQAAI DSVPSNNNNW IRIHVKRGIY REKVQIPLDK PYILLEGEGS 60 KSTVIEWNDC DNIDKPAFGA YADNFVAKYI GFLTIEMRRR AVAAHIAGDK AAFYECGFYG 120 LQDTLYDKCG RHYFKSCYID GSVDFIFGNG QSIYEVCKWT SLQPGLAGFI TAQGRESMNE 180 NTGFVFKQCS VFGSGTTYLG RARRAYSRVL FYQSDISDVV VPQGWNPGEY GGHEGTITYA 240 EYGCKGSGSN TAGRVPWETK MDPKTANYFA DISYINQDGW LNKQP* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02682 | PLN02682 | 1.0e-83 | 17 | 281 | 285 | + pectinesterase family protein | ||
PLN02432 | PLN02432 | 2.0e-84 | 17 | 281 | 267 | + putative pectinesterase | ||
PLN02480 | PLN02480 | 1.0e-84 | 17 | 281 | 277 | + Probable pectinesterase | ||
PLN02176 | PLN02176 | 1.0e-84 | 17 | 285 | 284 | + putative pectinesterase | ||
PLN02497 | PLN02497 | 6.0e-123 | 17 | 285 | 283 | + probable pectinesterase |
Gene Ontology | |
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GO Term | Description |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI40838.1 | 0 | 1 | 285 | 41 | 341 | unnamed protein product [Vitis vinifera] |
GenBank | EAY73651.1 | 0 | 1 | 285 | 41 | 334 | hypothetical protein OsI_01540 [Oryza sativa Indica Group] |
RefSeq | XP_002263748.1 | 0 | 4 | 285 | 31 | 328 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002323773.1 | 0 | 11 | 285 | 9 | 288 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002518106.1 | 0 | 11 | 285 | 56 | 335 | Pectinesterase U1 precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 2.94273e-44 | 11 | 281 | 17 | 308 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 1e-33 | 11 | 281 | 13 | 304 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 3uw0_A | 0.00000000000006 | 6 | 157 | 37 | 215 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
PDB | 1qjv_B | 0.0000000000001 | 1 | 192 | 6 | 228 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 1qjv_A | 0.0000000000001 | 1 | 192 | 6 | 228 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
DV984237 | 284 | 17 | 283 | 0 |
EX315894 | 274 | 27 | 283 | 0 |
EX317112 | 273 | 28 | 283 | 0 |
GR458872 | 272 | 17 | 276 | 0 |
ES902377 | 274 | 20 | 281 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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