| Basic Information | |
|---|---|
| Species | Aquilegia coerulea |
| Cazyme ID | Aquca_015_00229.1 |
| Family | PL1 |
| Protein Properties | Length: 367 Molecular Weight: 41476.6 Isoelectric Point: 11.3149 |
| Chromosome | Chromosome/Scaffold: 15 Start: 1818622 End: 1820095 |
| Description | Pectin lyase-like superfamily protein |
| View CDS | |
| External Links |
|---|
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| PL1 | 108 | 291 | 6.09985e-42 |
| ITFQRDMHIKLERKLFVSSFTTIDGRGAKVMYVLPIHLMALHDQVHDVIIHGLHFHHLRSRAPGLVIAPGSTVAQLPKTDGDAIRLVGASKVLGSTDITI SNNRFNDHDKVMLLGHDDGFVQDRNMRVTIVFNRFGRKCDQRMPRIRHGYAHIANNYYQGWGDYAIGGTMNPTVRSEANIFKAP | |||
| Full Sequence |
|---|
| Protein Sequence Length: 367 Download |
| MVFSPNRILY IIVLSIFLFS LATPSLAKRP RRRTSLNTID RCWQRNRNWS KNRQQLATCS 60 VGFAGKMTNN IGKGLIHYTV TDPSDDPMNP RFGTLRYGAT KLGGKVWITF QRDMHIKLER 120 KLFVSSFTTI DGRGAKVMYV LPIHLMALHD QVHDVIIHGL HFHHLRSRAP GLVIAPGSTV 180 AQLPKTDGDA IRLVGASKVL GSTDITISNN RFNDHDKVML LGHDDGFVQD RNMRVTIVFN 240 RFGRKCDQRM PRIRHGYAHI ANNYYQGWGD YAIGGTMNPT VRSEANIFKA PKRNKEVTWK 300 AGNSRSWNWR SVNDIFLNGA HFSQSGKDSA QPHYNRGQRF QVARARDVKS VTKSAGALRC 360 STRSRC* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG3866 | PelB | 5.0e-20 | 201 | 357 | 164 | + Pectate lyase [Carbohydrate transport and metabolism] | ||
| pfam00544 | Pec_lyase_C | 4.0e-38 | 126 | 288 | 189 | + Pectate lyase. This enzyme forms a right handed beta helix structure. Pectate lyase is an enzyme involved in the maceration and soft rotting of plant tissue. | ||
| smart00656 | Amb_all | 1.0e-46 | 124 | 292 | 196 | + Amb_all domain. | ||
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| DDBJ | BAD01325.1 | 0 | 34 | 366 | 25 | 384 | putative Cup s 1 pollen allergen [Oryza sativa Japonica Group] |
| RefSeq | XP_002267384.1 | 0 | 14 | 366 | 6 | 369 | PREDICTED: similar to putative Cup s 1 pollen allergen [Vitis vinifera] |
| RefSeq | XP_002299118.1 | 0 | 36 | 366 | 1 | 354 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002304865.1 | 0 | 36 | 366 | 1 | 352 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002458626.1 | 0 | 37 | 366 | 25 | 373 | hypothetical protein SORBIDRAFT_03g036930 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1pxz_B | 0 | 37 | 358 | 2 | 345 | A Chain A, 1.7 Angstrom Crystal Structure Of Jun A 1, The Major Allergen From Cedar Pollen |
| PDB | 1pxz_A | 0 | 37 | 358 | 2 | 345 | A Chain A, 1.7 Angstrom Crystal Structure Of Jun A 1, The Major Allergen From Cedar Pollen |
| PDB | 1vbl_A | 0.000000007 | 195 | 266 | 230 | 302 | A Chain A, Structure Of The Thermostable Pectate Lyase Pl 47 |
| PDB | 1jta_A | 0.00000001 | 201 | 326 | 192 | 325 | A Chain A, Structure Of The Thermostable Pectate Lyase Pl 47 |
| PDB | 1jrg_B | 0.00000001 | 201 | 326 | 192 | 325 | A Chain A, Crystal Structure Of The R3 Form Of Pectate Lyase A, Erwinia Chrysanthemi |
