y
Basic Information | |
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Species | Aquilegia coerulea |
Cazyme ID | Aquca_019_00164.2 |
Family | CE8 |
Protein Properties | Length: 378 Molecular Weight: 41673.4 Isoelectric Point: 9.7186 |
Chromosome | Chromosome/Scaffold: 19 Start: 3393342 End: 3395955 |
Description | Pectin lyase-like superfamily protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 110 | 354 | 0 |
TVGLKGCASFSSVQKAVDASPDHSSRRTLILMDSGLYKEKVVVPSNKTNLIFQGQGYLNTYIAWNDTANSTGGTVNSSTVAIYAPSFTAYNISFQNTAPP PSPGQVGAQAIALRITGDQVAFYGCGFYGAQDTLNDDQGRHYFKDCFIQGSIDFIFGRARSLYKDCMINSIAKEVTKGISGSIAAHGRQSIDEETGFSFV NCTIGGSGKVWLGRAWGAFSTVIFARTFMSDVVYPAGWNDWNDPS |
Full Sequence |
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Protein Sequence Length: 378 Download |
MDNYNFSISS SRSKTNLCFW FIAFIIALVS VFIAFNTISS SSSTTTSTLQ VTVLDKIFKQ 60 GGMENILIVV KRIVSGISRQ HPHKRHKKKC DKTKWRSRLV SDYNVSLVLT VGLKGCASFS 120 SVQKAVDASP DHSSRRTLIL MDSGLYKEKV VVPSNKTNLI FQGQGYLNTY IAWNDTANST 180 GGTVNSSTVA IYAPSFTAYN ISFQNTAPPP SPGQVGAQAI ALRITGDQVA FYGCGFYGAQ 240 DTLNDDQGRH YFKDCFIQGS IDFIFGRARS LYKDCMINSI AKEVTKGISG SIAAHGRQSI 300 DEETGFSFVN CTIGGSGKVW LGRAWGAFST VIFARTFMSD VVYPAGWNDW NDPSKDQSVD 360 CVLWRIRVYR TWSKLHI* 420 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02665 | PLN02665 | 1.0e-79 | 108 | 359 | 253 | + pectinesterase family protein | ||
PLN02671 | PLN02671 | 2.0e-80 | 102 | 359 | 266 | + pectinesterase | ||
PLN02634 | PLN02634 | 4.0e-95 | 107 | 354 | 254 | + probable pectinesterase | ||
PLN02682 | PLN02682 | 7.0e-103 | 105 | 359 | 262 | + pectinesterase family protein | ||
PLN02304 | PLN02304 | 8.0e-129 | 102 | 359 | 261 | + probable pectinesterase |
Gene Ontology | |
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GO Term | Description |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI30191.1 | 0 | 39 | 359 | 30 | 355 | unnamed protein product [Vitis vinifera] |
RefSeq | NP_181209.1 | 0 | 94 | 359 | 76 | 341 | pectinesterase family protein [Arabidopsis thaliana] |
RefSeq | XP_002264941.1 | 0 | 108 | 359 | 14 | 265 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002326223.1 | 0 | 94 | 359 | 3 | 269 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002519425.1 | 0 | 39 | 359 | 33 | 323 | Pectinesterase PPE8B precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 8.99998e-41 | 109 | 351 | 9 | 253 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 1e-33 | 111 | 351 | 7 | 249 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 3uw0_A | 0.000000000000001 | 118 | 348 | 43 | 304 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
PDB | 2ntq_B | 0.0000000000001 | 118 | 348 | 17 | 280 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
PDB | 2ntq_A | 0.0000000000001 | 118 | 348 | 17 | 280 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |