Basic Information | |
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Species | Aquilegia coerulea |
Cazyme ID | Aquca_025_00035.1 |
Family | CE8 |
Protein Properties | Length: 379 Molecular Weight: 41585 Isoelectric Point: 7.3926 |
Chromosome | Chromosome/Scaffold: 25 Start: 171018 End: 173058 |
Description | Pectin lyase-like superfamily protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 78 | 370 | 0 |
CVDRNGCCKFTTVQSAIDAVGNFSLKRNIIWINNGIYFEKVLVPKTKPNITFQGQGFETTAIIWNDTANSSHGTFYSGSVQVFATNFIAKNISFMNVAPI PGPGAVGAQAVAIRVSGDQAAFWGCGFFGSQDTLHDDRGRHYFKDCFIQGSIDFIFGNARSLYENCQLNSMANPVPVGVKSINGAITAHGRASNDENTGF AFVNCNVGGTGRIWLGRAWRPFSRVVFSYTSMSDIISPEGWNDFNDPTRDQTIFYGEYKCTGGGANVTMRAPYTQMLNDTQASPFLSTSFIDG |
Full Sequence |
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Protein Sequence Length: 379 Download |
MALIKGISLC FILYAIFVAF VSTNNLSSLP IISPLLIPNN IDRQRKHRHH KEETKTSICD 60 DFPAGFPPPD TNTTSILCVD RNGCCKFTTV QSAIDAVGNF SLKRNIIWIN NGIYFEKVLV 120 PKTKPNITFQ GQGFETTAII WNDTANSSHG TFYSGSVQVF ATNFIAKNIS FMNVAPIPGP 180 GAVGAQAVAI RVSGDQAAFW GCGFFGSQDT LHDDRGRHYF KDCFIQGSID FIFGNARSLY 240 ENCQLNSMAN PVPVGVKSIN GAITAHGRAS NDENTGFAFV NCNVGGTGRI WLGRAWRPFS 300 RVVFSYTSMS DIISPEGWND FNDPTRDQTI FYGEYKCTGG GANVTMRAPY TQMLNDTQAS 360 PFLSTSFIDG DQWLEPFK* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02432 | PLN02432 | 3.0e-94 | 68 | 374 | 307 | + putative pectinesterase | ||
PLN02634 | PLN02634 | 2.0e-95 | 45 | 376 | 340 | + probable pectinesterase | ||
PLN02665 | PLN02665 | 6.0e-105 | 76 | 376 | 302 | + pectinesterase family protein | ||
PLN02682 | PLN02682 | 7.0e-117 | 77 | 376 | 307 | + pectinesterase family protein | ||
PLN02304 | PLN02304 | 0 | 47 | 377 | 331 | + probable pectinesterase |
Gene Ontology | |
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GO Term | Description |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABN08648.1 | 0 | 57 | 375 | 70 | 388 | Pectinesterase [Medicago truncatula] |
RefSeq | NP_172023.1 | 0 | 53 | 375 | 67 | 389 | pectinesterase family protein [Arabidopsis thaliana] |
RefSeq | XP_002267842.1 | 0 | 21 | 377 | 39 | 396 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002323171.1 | 0 | 47 | 377 | 48 | 378 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002521065.1 | 0 | 18 | 377 | 36 | 394 | Pectinesterase-1 precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 0 | 77 | 375 | 9 | 309 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 1e-38 | 78 | 375 | 6 | 305 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntq_B | 9e-18 | 106 | 368 | 36 | 334 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntq_A | 9e-18 | 106 | 368 | 36 | 334 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntp_B | 9e-18 | 106 | 368 | 36 | 334 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |