y
Basic Information | |
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Species | Aquilegia coerulea |
Cazyme ID | Aquca_025_00047.1 |
Family | GT47 |
Protein Properties | Length: 604 Molecular Weight: 68742 Isoelectric Point: 6.6065 |
Chromosome | Chromosome/Scaffold: 25 Start: 236669 End: 240722 |
Description | Exostosin family protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT47 | 144 | 484 | 0 |
GGRYIYVHDLPPKFNEDMLKECKSLSLWTNMCKFTTNAGLGPPLENIEGVFSNTGWYATNQFAVDVIFSNRMKQYECLTKDSSIAAAVFVPFYAGLDIAR YLWGYNISVRDAASLELVDWLSKRPEWSVMGGKDHFLVAGRITWDFRRLSDLDSDWGNKLLFLPAARNMSMLVVESSPWNANDFGIPYPTYFHPAKDADV FSWQDRMRKLDRPWLFSFAGAPRPDNPKSIRGQIIEQCKKSKVGKLLECDFGESKCHSPSSIMQMFQSSLFCLQPQGDSYTRRSAFDSMLAGCIPVFFHP GSAYTQYTWHLPKNYSKYSVFIPEDDLRKRNISIEERLSQI |
Full Sequence |
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Protein Sequence Length: 604 Download |
MRRRSTATLN PDQMEKVVGK NQRSRLCLLA ALSVMFWFLL FYFHFVVLGS GSVDDSIKLP 60 SSSPVYDDDE SINEHPISKN TVDTGLTDKS RVSSNVPVYS ESIDKSRVVE VPVQLESTNK 120 PQVSKNFPFM KALKTIENKS DPCGGRYIYV HDLPPKFNED MLKECKSLSL WTNMCKFTTN 180 AGLGPPLENI EGVFSNTGWY ATNQFAVDVI FSNRMKQYEC LTKDSSIAAA VFVPFYAGLD 240 IARYLWGYNI SVRDAASLEL VDWLSKRPEW SVMGGKDHFL VAGRITWDFR RLSDLDSDWG 300 NKLLFLPAAR NMSMLVVESS PWNANDFGIP YPTYFHPAKD ADVFSWQDRM RKLDRPWLFS 360 FAGAPRPDNP KSIRGQIIEQ CKKSKVGKLL ECDFGESKCH SPSSIMQMFQ SSLFCLQPQG 420 DSYTRRSAFD SMLAGCIPVF FHPGSAYTQY TWHLPKNYSK YSVFIPEDDL RKRNISIEER 480 LSQISVEDVK VMREAVISLI PQLIYADPRF RLETLKDAFD VAVQAIINKV TKLRNDIVEG 540 RTNDNFVEEN SWKYELLEEG QREVGAHEWD PFFSKPKDAN ADSGESSAEA AKNSWKNEQR 600 DKS* 660 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam03016 | Exostosin | 8.0e-74 | 142 | 484 | 358 | + Exostosin family. The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. |
Gene Ontology | |
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GO Term | Description |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACY08857.1 | 0 | 1 | 603 | 1 | 617 | xyloglucan galactosyltransferase [Eucalyptus grandis] |
GenBank | EEC74507.1 | 0 | 1 | 603 | 4 | 604 | hypothetical protein OsI_09988 [Oryza sativa Indica Group] |
RefSeq | XP_002269766.1 | 0 | 1 | 584 | 59 | 649 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002301846.1 | 0 | 14 | 603 | 1 | 585 | glycosyltransferase, CAZy family GT47 [Populus trichocarpa] |
RefSeq | XP_002468517.1 | 0 | 1 | 603 | 1 | 599 | hypothetical protein SORBIDRAFT_01g047270 [Sorghum bicolor] |