Basic Information | |
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Species | Aquilegia coerulea |
Cazyme ID | Aquca_025_00352.3 |
Family | GT8 |
Protein Properties | Length: 236 Molecular Weight: 26846.8 Isoelectric Point: 4.7722 |
Chromosome | Chromosome/Scaffold: 25 Start: 2969377 End: 2971418 |
Description | galactinol synthase 4 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT8 | 9 | 220 | 2.1e-39 |
MISGTGKVATTYNVGYSKRAYVTFLAGNGDYVKGVVGLAKGLRKVKSAYPLVVAMLPDVPEEHRELLRSQGCIVREIEPIYPPENQVQFAMAYYVINYSK LRIWNFEEYSKMVYLDADIQVYENIDHLLDATDGYFYAVMDCFCEKTWSHSPQYSVGYCQQCPDKVTWPTEMGSPPSLYFNAGMFVFEPSRLTFDSLIEN LRITVPTLFAEQ |
Full Sequence |
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Protein Sequence Length: 236 Download |
MAPSISDDMI SGTGKVATTY NVGYSKRAYV TFLAGNGDYV KGVVGLAKGL RKVKSAYPLV 60 VAMLPDVPEE HRELLRSQGC IVREIEPIYP PENQVQFAMA YYVINYSKLR IWNFEEYSKM 120 VYLDADIQVY ENIDHLLDAT DGYFYAVMDC FCEKTWSHSP QYSVGYCQQC PDKVTWPTEM 180 GSPPSLYFNA GMFVFEPSRL TFDSLIENLR ITVPTLFAEQ VSLLDLNFFA KRFVW* 240 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
cd00505 | Glyco_transf_8 | 2.0e-6 | 30 | 206 | 187 | + Members of glycosyltransferase family 8 (GT-8) are involved in lipopolysaccharide biosynthesis and glycogen synthesis. Members of this family are involved in lipopolysaccharide biosynthesis and glycogen synthesis. GT-8 comprises enzymes with a number of known activities: lipopolysaccharide galactosyltransferase, lipopolysaccharide glucosyltransferase 1, glycogenin glucosyltransferase, and N-acetylglucosaminyltransferase. GT-8 enzymes contains a conserved DXD motif which is essential in the coordination of a catalytic divalent cation, most commonly Mn2+. | ||
COG5597 | COG5597 | 2.0e-9 | 54 | 206 | 181 | + Alpha-N-acetylglucosamine transferase [Cell envelope biogenesis, outer membrane] | ||
pfam01501 | Glyco_transf_8 | 1.0e-38 | 30 | 229 | 212 | + Glycosyl transferase family 8. This family includes enzymes that transfer sugar residues to donor molecules. Members of this family are involved in lipopolysaccharide biosynthesis and glycogen synthesis. This family includes Lipopolysaccharide galactosyltransferase, lipopolysaccharide glucosyltransferase 1, and glycogenin glucosyltransferase. | ||
cd02537 | GT8_Glycogenin | 9.0e-59 | 27 | 235 | 209 | + Glycogenin belongs the GT 8 family and initiates the biosynthesis of glycogen. Glycogenin initiates the biosynthesis of glycogen by incorporating glucose residues through a self-glucosylation reaction at a Tyr residue, and then acts as substrate for chain elongation by glycogen synthase and branching enzyme. It contains a conserved DxD motif and an N-terminal beta-alpha-beta Rossmann-like fold that are common to the nucleotide-binding domains of most glycosyltransferases. The DxD motif is essential for coordination of the catalytic divalent cation, most commonly Mn2+. Glycogenin can be classified as a retaining glycosyltransferase, based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed. It is placed in glycosyltransferase family 8 which includes lipopolysaccharide glucose and galactose transferases and galactinol synthases. | ||
PLN00176 | PLN00176 | 8.0e-164 | 1 | 220 | 220 | + galactinol synthase |
Gene Ontology | |
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GO Term | Description |
GO:0016757 | transferase activity, transferring glycosyl groups |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABK93731.1 | 0 | 1 | 233 | 1 | 230 | unknown [Populus trichocarpa] |
GenBank | ACA04028.1 | 0 | 1 | 233 | 1 | 231 | galactinol synthase 1 [Populus trichocarpa x Populus deltoides] |
DDBJ | BAF99254.1 | 0 | 1 | 220 | 1 | 219 | galactinol synthase [Coptis japonica] |
RefSeq | XP_002265947.1 | 0 | 1 | 220 | 1 | 219 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002314613.1 | 0 | 1 | 233 | 1 | 230 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3u2w_B | 0.000000003 | 25 | 207 | 3 | 152 | A Chain A, Structure Of Udp-Galactose 4-Epimerase Mutant |
PDB | 3u2w_A | 0.000000003 | 25 | 207 | 3 | 152 | A Chain A, Structure Of Udp-Galactose 4-Epimerase Mutant |
PDB | 3qvb_A | 0.000000003 | 25 | 207 | 3 | 152 | A Chain A, Structure Of Udp-Galactose 4-Epimerase Mutant |
PDB | 3q4s_A | 0.000000003 | 25 | 207 | 3 | 152 | A Chain A, Crystal Structure Of Human Glycogenin-1 (Gyg1), Apo Form |
PDB | 3u2x_B | 0.000000004 | 25 | 207 | 3 | 152 | A Chain A, Crystal Structure Of Human Glycogenin-1 (Gyg1), Apo Form |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
JZ010680 | 222 | 1 | 222 | 0 |
JZ020519 | 220 | 1 | 220 | 0 |
JZ012249 | 220 | 1 | 220 | 0 |
DR933877 | 220 | 1 | 220 | 0 |
DR939835 | 220 | 1 | 220 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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