Basic Information | |
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Species | Aquilegia coerulea |
Cazyme ID | Aquca_029_00012.1 |
Family | CE8 |
Protein Properties | Length: 351 Molecular Weight: 39244.5 Isoelectric Point: 8.6134 |
Chromosome | Chromosome/Scaffold: 29 Start: 211906 End: 213583 |
Description | Pectin lyase-like superfamily protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 51 | 338 | 0 |
KVDIKGDGDYKSVQQAINSVPNGNSQWIIIHVRKGIYREKLHIPKEKQYIFMRGNGKGKTHIVWDRCSDNNTDSATLRVDASNFVAFGISFKNNANIGLP YEIQNEKQSVAALVGGDKVAFYHCAFYSAHNTLFDYKGRHFYDDCYIQGSIDFIFGRARSIFHRCEIFVVSDDRVEIGGSITAQSRESADEKSGLVFVEG RVYGVGGVYLGRAKGAYSRVIFAKTYLSKTIVPQGWTNWSYHGTVKNLYQAEYKCYGPGSYTANRAPWALQLDEKEVAPFMSLDFIDG |
Full Sequence |
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Protein Sequence Length: 351 Download |
MQMSIPIVFL GIIVSSLVIA DHVVYGFKPN DNDIIDASVL TERIGSNRTI KVDIKGDGDY 60 KSVQQAINSV PNGNSQWIII HVRKGIYREK LHIPKEKQYI FMRGNGKGKT HIVWDRCSDN 120 NTDSATLRVD ASNFVAFGIS FKNNANIGLP YEIQNEKQSV AALVGGDKVA FYHCAFYSAH 180 NTLFDYKGRH FYDDCYIQGS IDFIFGRARS IFHRCEIFVV SDDRVEIGGS ITAQSRESAD 240 EKSGLVFVEG RVYGVGGVYL GRAKGAYSRV IFAKTYLSKT IVPQGWTNWS YHGTVKNLYQ 300 AEYKCYGPGS YTANRAPWAL QLDEKEVAPF MSLDFIDGAE WLPAHRLLKA * 360 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02665 | PLN02665 | 2.0e-77 | 48 | 342 | 305 | + pectinesterase family protein | ||
PLN02497 | PLN02497 | 1.0e-80 | 48 | 342 | 296 | + probable pectinesterase | ||
PLN02432 | PLN02432 | 3.0e-83 | 50 | 342 | 293 | + putative pectinesterase | ||
PLN02682 | PLN02682 | 5.0e-84 | 43 | 343 | 311 | + pectinesterase family protein | ||
PLN02480 | PLN02480 | 3.0e-178 | 32 | 344 | 313 | + Probable pectinesterase |
Gene Ontology | |
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GO Term | Description |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACU23222.1 | 0 | 3 | 344 | 1 | 344 | unknown [Glycine max] |
RefSeq | NP_188331.1 | 0 | 36 | 343 | 32 | 337 | pectinesterase family protein [Arabidopsis thaliana] |
RefSeq | XP_002272939.1 | 0 | 3 | 344 | 7 | 346 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002311381.1 | 0 | 9 | 343 | 11 | 339 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002523016.1 | 0 | 34 | 343 | 41 | 347 | Pectinesterase-2 precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 2.00386e-43 | 41 | 344 | 2 | 310 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 4e-36 | 56 | 342 | 11 | 304 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 3uw0_A | 0.000000000000003 | 47 | 258 | 32 | 258 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
PDB | 1qjv_B | 0.00000000000009 | 60 | 252 | 18 | 227 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 1qjv_A | 0.00000000000009 | 60 | 252 | 18 | 227 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |